[med-svn] [Git][med-team/snakemake][master] 3 commits: New upstream version 5.20.1

[Rebecca N. Palmer]

Rebecca N. Palmer pushed to branch master at Debian Med / snakemake


Commits:
f9a2bf83 by Rebecca N. Palmer at 2020-07-14T22:35:30+01:00
New upstream version 5.20.1
- - - - -
9f369dc9 by Rebecca N. Palmer at 2020-07-14T22:35:52+01:00
Update upstream source from tag 'upstream/5.20.1'

Update to upstream version '5.20.1'
with Debian dir 9f1775cdf2e59554add639cfe4169a0744ea49ab
- - - - -
7c0d3cf0 by Rebecca N. Palmer at 2020-07-15T08:32:59+01:00
Refresh patch

- - - - -


30 changed files:

- .github/workflows/docker-publish-release.yml
- .github/workflows/docker-publish.yml
- CHANGELOG.rst
- debian/changelog
- debian/patches/local_javascript.patch
- + docs/_static/theme.css
- docs/conf.py
- docs/getting_started/installation.rst
- docs/index.rst
- docs/project_info/faq.rst
- snakemake/__init__.py
- snakemake/_version.py
- snakemake/dag.py
- snakemake/deployment/conda.py
- snakemake/exceptions.py
- snakemake/io.py
- snakemake/jobs.py
- snakemake/linting/snakefiles.py
- snakemake/logging.py
- snakemake/remote/FTP.py
- snakemake/remote/XRootD.py
- snakemake/script.py
- snakemake/shell.py
- snakemake/workflow.py
- + tests/test_github_issue456/Snakefile
- + tests/test_github_issue456/expected-results/test.txt
- + tests/test_github_issue456/references/gffs/test.gff
- tests/test_io.py
- tests/test_kubernetes/README.md
- tests/test_script/expected-results/test.html


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/c4af6e19ff7ac658fcc417c3517c35346ccab626...7c0d3cf056b9c083164bb948a9efd0ee32230026

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View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/c4af6e19ff7ac658fcc417c3517c35346ccab626...7c0d3cf056b9c083164bb948a9efd0ee32230026
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