[med-svn] [Git][med-team/vcfanno][upstream] New upstream version 0.3.2+ds
Nilesh Patra
gitlab at salsa.debian.org
Fri Jul 17 22:16:57 BST 2020
Nilesh Patra pushed to branch upstream at Debian Med / vcfanno
Commits:
10302f9a by Nilesh Patra at 2020-07-17T19:24:15+00:00
New upstream version 0.3.2+ds
- - - - -
24 changed files:
- − docs/examples/gff_sv/genes.gff3.gz.tbi
- − example/ex.bam
- − example/ex.bam.bai
- − example/exac.vcf.gz.tbi
- − example/fitcons.bed.gz.tbi
- − tests/astar/astar.anno.vcf.gz.tbi
- − tests/by_alt_float/annotation.tsv.gz.tbi
- − tests/citest/at/testexon.bed.gz.tbi
- − tests/citest/dummyexons.bed.gz.tbi
- − tests/data/multiple-alts.vcf.gz.tbi
- − tests/data/number.vcf.gz.tbi
- − tests/dbnsfp/dbNSFP_ex.txt.gz.tbi
- − tests/dbnsfp/dbNSFP_example.txt.gz.tbi
- − tests/id-test/cosmic.small.vcf.gz.tbi
- − tests/id-test/dbsnp.small.vcf.gz.tbi
- − tests/id-test/small.vcf.gz.tbi
- − tests/multiple-alts/ma-db.vcf.gz.tbi
- − tests/notbgz/gno.vcf.gz.tbi
- − tests/overwrite-multiple-alts/a/whole.vcf.gz.tbi
- − tests/overwrite-multiple-alts/b/cadd_indels.vcf.gz.tbi
- − tests/overwrite-multiple-alts/b/whole_genome_snv_slice.vcf.gz.tbi
- − tests/ref-alt-test/tmp_annotation.txt.gz.tbi
- − tests/ref-alt-test/tmp_calls.vcf.gz.tbi
- − tests/testVA/test-gnomad.vcf.gz.tbi
Changes:
=====================================
docs/examples/gff_sv/genes.gff3.gz.tbi deleted
=====================================
Binary files a/docs/examples/gff_sv/genes.gff3.gz.tbi and /dev/null differ
=====================================
example/ex.bam deleted
=====================================
Binary files a/example/ex.bam and /dev/null differ
=====================================
example/ex.bam.bai deleted
=====================================
Binary files a/example/ex.bam.bai and /dev/null differ
=====================================
example/exac.vcf.gz.tbi deleted
=====================================
Binary files a/example/exac.vcf.gz.tbi and /dev/null differ
=====================================
example/fitcons.bed.gz.tbi deleted
=====================================
Binary files a/example/fitcons.bed.gz.tbi and /dev/null differ
=====================================
tests/astar/astar.anno.vcf.gz.tbi deleted
=====================================
Binary files a/tests/astar/astar.anno.vcf.gz.tbi and /dev/null differ
=====================================
tests/by_alt_float/annotation.tsv.gz.tbi deleted
=====================================
Binary files a/tests/by_alt_float/annotation.tsv.gz.tbi and /dev/null differ
=====================================
tests/citest/at/testexon.bed.gz.tbi deleted
=====================================
Binary files a/tests/citest/at/testexon.bed.gz.tbi and /dev/null differ
=====================================
tests/citest/dummyexons.bed.gz.tbi deleted
=====================================
Binary files a/tests/citest/dummyexons.bed.gz.tbi and /dev/null differ
=====================================
tests/data/multiple-alts.vcf.gz.tbi deleted
=====================================
Binary files a/tests/data/multiple-alts.vcf.gz.tbi and /dev/null differ
=====================================
tests/data/number.vcf.gz.tbi deleted
=====================================
Binary files a/tests/data/number.vcf.gz.tbi and /dev/null differ
=====================================
tests/dbnsfp/dbNSFP_ex.txt.gz.tbi deleted
=====================================
Binary files a/tests/dbnsfp/dbNSFP_ex.txt.gz.tbi and /dev/null differ
=====================================
tests/dbnsfp/dbNSFP_example.txt.gz.tbi deleted
=====================================
Binary files a/tests/dbnsfp/dbNSFP_example.txt.gz.tbi and /dev/null differ
=====================================
tests/id-test/cosmic.small.vcf.gz.tbi deleted
=====================================
Binary files a/tests/id-test/cosmic.small.vcf.gz.tbi and /dev/null differ
=====================================
tests/id-test/dbsnp.small.vcf.gz.tbi deleted
=====================================
Binary files a/tests/id-test/dbsnp.small.vcf.gz.tbi and /dev/null differ
=====================================
tests/id-test/small.vcf.gz.tbi deleted
=====================================
Binary files a/tests/id-test/small.vcf.gz.tbi and /dev/null differ
=====================================
tests/multiple-alts/ma-db.vcf.gz.tbi deleted
=====================================
Binary files a/tests/multiple-alts/ma-db.vcf.gz.tbi and /dev/null differ
=====================================
tests/notbgz/gno.vcf.gz.tbi deleted
=====================================
Binary files a/tests/notbgz/gno.vcf.gz.tbi and /dev/null differ
=====================================
tests/overwrite-multiple-alts/a/whole.vcf.gz.tbi deleted
=====================================
Binary files a/tests/overwrite-multiple-alts/a/whole.vcf.gz.tbi and /dev/null differ
=====================================
tests/overwrite-multiple-alts/b/cadd_indels.vcf.gz.tbi deleted
=====================================
Binary files a/tests/overwrite-multiple-alts/b/cadd_indels.vcf.gz.tbi and /dev/null differ
=====================================
tests/overwrite-multiple-alts/b/whole_genome_snv_slice.vcf.gz.tbi deleted
=====================================
Binary files a/tests/overwrite-multiple-alts/b/whole_genome_snv_slice.vcf.gz.tbi and /dev/null differ
=====================================
tests/ref-alt-test/tmp_annotation.txt.gz.tbi deleted
=====================================
Binary files a/tests/ref-alt-test/tmp_annotation.txt.gz.tbi and /dev/null differ
=====================================
tests/ref-alt-test/tmp_calls.vcf.gz.tbi deleted
=====================================
Binary files a/tests/ref-alt-test/tmp_calls.vcf.gz.tbi and /dev/null differ
=====================================
tests/testVA/test-gnomad.vcf.gz.tbi deleted
=====================================
Binary files a/tests/testVA/test-gnomad.vcf.gz.tbi and /dev/null differ
View it on GitLab: https://salsa.debian.org/med-team/vcfanno/-/commit/10302f9a4f0706518b1267e5ac1191e53b423219
--
View it on GitLab: https://salsa.debian.org/med-team/vcfanno/-/commit/10302f9a4f0706518b1267e5ac1191e53b423219
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200717/93f90d8e/attachment-0001.html>
More information about the debian-med-commit
mailing list