[med-svn] [Git][med-team/ampliconnoise][master] Replace reference files with their checksums

[Pranav Ballaney]

Pranav Ballaney pushed to branch master at Debian Med / ampliconnoise


Commits:
83bf76b9 by Pranav Ballaney at 2020-07-24T05:15:34+05:30
Replace reference files with their checksums

- - - - -


3 changed files:

- debian/ampliconnoise-examples.install
- − debian/tests/ref/C005.tar.xz
- debian/tests/run-unit-test


Changes:

=====================================
debian/ampliconnoise-examples.install
=====================================
@@ -1,3 +1,2 @@
-debian/tests/ref	usr/share/doc/ampliconnoise/examples
 debian/tests/Run.sh	usr/share/doc/ampliconnoise/examples
 Test/C005.dat		usr/share/doc/ampliconnoise/examples


=====================================
debian/tests/ref/C005.tar.xz deleted
=====================================
Binary files a/debian/tests/ref/C005.tar.xz and /dev/null differ


=====================================
debian/tests/run-unit-test
=====================================
@@ -14,19 +14,23 @@ cp -a /usr/share/doc/${pkg}/examples/* "${AUTOPKGTEST_TMP}"
 cd "${AUTOPKGTEST_TMP}"
 
 gunzip -r *
-ls -R
-./Run.sh C005.dat
-
-rm -rf C005_s60_c01 C005_s60_c01_T220_s30_c08
 
-cd ref && tar xvf C005.tar.xz
-rm C005.tar.xz
-
-# pwd
+./Run.sh C005.dat
 
-for file in *
-do
-  echo "${file}" "../${file}"
-  diff "${file}" "../${file}"
-  echo "${file} is identical to its reference."
-done
+# Output precomputed checksums to file
+echo d6887d8e940f823d6e1070692d438d2d C005_X.list >> checksums
+echo d20be5a6fce78395d767e84ed9e78ad8 C005_s60_c01.mapping >> checksums
+echo 3333dd1c1c9315b1bc0ea53eb5e408c2 C005_s60_c01.master >> checksums
+echo 14371657c17ea44b1bffd3779ac4d50b C005_s60_c01_T220.fa >> checksums
+echo ab7114c307e8faddf0e3e6da1c26081d C005_s60_c01_T220_S.list >> checksums
+echo 7c0dd9d92aaeb2c0dd32369ea066afff C005_s60_c01_T220_s30_c08.mapping >> checksums
+echo 4ce84f19c80d64f800602cf6c145bdf2 C005_s60_c01_T220_s30_c08_P.fa >> checksums
+echo 97467bf7a102958a51b11a26fa17f7f2 C005_s60_c01_T220_s30_c08_P.list >> checksums
+echo d73458b99089769c9363f6584c085524 C005_s60_c01_T220_s30_c08_P.otu >> checksums
+echo bd85775030379914ce5c8d90b89941e7 C005_s60_c01_T220_s30_c08_P.tree >> checksums
+echo 4ce84f19c80d64f800602cf6c145bdf2 C005_s60_c01_T220_s30_c08_cd.fa >> checksums
+echo 4215fa70dfd3e4b51368fbbe40ca7021 C005_s60_c01_T220_s30_c08_cd.mapping >> checksums
+echo b7e06a3f231925c35ee3b747bbe5ae31 C005_s60_c01_cd.fa >> checksums
+echo d0fc9be11a1817fcf5afdad0a1a560b7 C005_s60_c01_cd.qual >> checksums
+
+md5sum --check checksums



View it on GitLab: https://salsa.debian.org/med-team/ampliconnoise/-/commit/83bf76b9337419b4e1cc3d053fecff08d755964e

-- 
View it on GitLab: https://salsa.debian.org/med-team/ampliconnoise/-/commit/83bf76b9337419b4e1cc3d053fecff08d755964e
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