[med-svn] [Git][med-team/prime-phylo][master] 4 commits: Fix gcc-10 FTBFS

[Nilesh Patra]

Nilesh Patra pushed to branch master at Debian Med / prime-phylo


Commits:
b3c02681 by Nilesh Patra at 2020-07-26T20:00:10+05:30
Fix gcc-10 FTBFS

- - - - -
76b05459 by Nilesh Patra at 2020-07-26T20:01:00+05:30
compat version: 13

- - - - -
7f9306c9 by Nilesh Patra at 2020-07-26T20:01:23+05:30
Add "Rules-Requires-Root:no"

- - - - -
63b1fa81 by Nilesh Patra at 2020-07-26T20:02:30+05:30
Update changelog

- - - - -


4 changed files:

- debian/changelog
- debian/control
- + debian/patches/0004-fix-gcc10-build.patch
- debian/patches/series


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+prime-phylo (1.0.11-9) unstable; urgency=medium
+
+  * Fix gcc-10 FTBFS (Closes: #957708)
+  * compat version: 13
+  * Add "Rules-Requires-Root:no"
+
+ -- Nilesh Patra <npatra974 at gmail.com>  Sun, 26 Jul 2020 20:01:51 +0530
+
 prime-phylo (1.0.11-8) unstable; urgency=medium
 
   * Suggests: s/python-biopython/python3-biopython/


=====================================
debian/control
=====================================
@@ -4,7 +4,7 @@ Uploaders: Erik Sjolund <erik.sjolund at gmail.com>,
            Andreas Tille <tille at debian.org>
 Section: science
 Priority: optional
-Build-Depends: debhelper-compat (= 12),
+Build-Depends: debhelper-compat (= 13),
                gengetopt,
                cmake,
                libblas-dev,
@@ -22,6 +22,7 @@ Standards-Version: 4.4.1
 Vcs-Browser: https://salsa.debian.org/med-team/prime-phylo
 Vcs-Git: https://salsa.debian.org/med-team/prime-phylo.git
 Homepage: http://prime.sbc.su.se
+Rules-Requires-Root: no
 
 Package: prime-phylo
 Architecture: any


=====================================
debian/patches/0004-fix-gcc10-build.patch
=====================================
@@ -0,0 +1,16 @@
+Author: Nilesh Patra <npatra974 at gmail.com>
+Description: Append extern to prevent gcc-10 FTBFS
+Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?archive=no&bug=957708
+Last-Updated: July 26, 2020
+
+--- a/src/cxx/libraries/sfile/gbread.c
++++ b/src/cxx/libraries/sfile/gbread.c
+@@ -1,7 +1,7 @@
+ 
+ #include <stdio.h>
+ 
+-int yydebug;
++extern int yydebug;
+ 
+ #include "sfile.h"
+ #include "gb.tab.h"


=====================================
debian/patches/series
=====================================
@@ -2,3 +2,4 @@
 fix-ftbfs-with-Boost160.patch
 fix-gcc-8.patch
 0003-Fix-build-with-Boost-1.67.patch
+0004-fix-gcc10-build.patch



View it on GitLab: https://salsa.debian.org/med-team/prime-phylo/-/compare/2af05ca3d949aa7e740d6cfc9303720bec2c73cc...63b1fa815c87a9fef74b451b29def3ce32e70103

-- 
View it on GitLab: https://salsa.debian.org/med-team/prime-phylo/-/compare/2af05ca3d949aa7e740d6cfc9303720bec2c73cc...63b1fa815c87a9fef74b451b29def3ce32e70103
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