Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
74a53e2e by Andreas Tille at 2020-06-03T13:45:58+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,34 +1,33 @@
-Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
+Last-Update: Wed, 03 Jun 2020 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 192 | {covid-19,imaging} |
+ dcmtk | 191 | {covid-19,imaging} |
orthanc | 95 | {imaging,covid-19,practice} |
gdcm | 56 | {imaging-dev} |
- orthanc-wsi | 45 | {imaging,laboratory,practice,covid-19,his,oncology} |
+ orthanc-wsi | 44 | {imaging,laboratory,practice,covid-19,his,oncology} |
htsjdk | 33 | {bio-dev} |
dicom3tools | 30 | {imaging} |
- dcm2niix | 28 | {imaging} |
+ dcm2niix | 29 | {imaging} |
dicomscope | 28 | {imaging} |
gdcm | 19 | {covid-19,imaging} |
minc-tools | 18 | {imaging} |
gnumed-server | 17 | {covid-19,practice} |
- insighttoolkit4 | 16 | {imaging-dev} |
+ insighttoolkit4 | 17 | {imaging-dev} |
invesalius | 15 | {imaging} |
- pixelmed | 14 | {imaging} |
+ ngs-sdk | 14 | {bio-dev} |
plastimatch | 14 | {imaging} |
vtk-dicom | 14 | {imaging} |
gdcm | 13 | {imaging-dev} |
king | 13 | {imaging,typesetting} |
- ngs-sdk | 13 | {bio-dev} |
+ pixelmed | 13 | {imaging} |
stacks | 13 | {bio} |
adun.app | 12 | {bio} |
openslide | 12 | {imaging} |
biosig4c++ | 11 | {physics,imaging} |
obitools | 11 | {bio} |
- librg-utils-perl | 10 | {bio} |
biojava-live | 9 | {bio-dev} |
- psychopy | 9 | {psychology} |
+ librg-utils-perl | 9 | {bio} |
radiant | 9 | {bio} |
ea-utils | 8 | {bio} |
ecopcr | 8 | {bio} |
@@ -36,9 +35,11 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
jebl2 | 8 | {bio-dev} |
mipe | 8 | {bio,cloud} |
ncbi-seg | 8 | {bio} |
+ ngs-sdk | 8 | {bio-dev} |
norsp | 8 | {bio} |
- piler | 8 | {bio} |
+ psychopy | 8 | {psychology} |
sibsim4 | 8 | {cloud,bio} |
+ staden | 8 | {bio} |
alter-sequence-alignment | 7 | {bio} |
ampliconnoise | 7 | {bio,cloud} |
arden | 7 | {cloud,bio} |
@@ -50,12 +51,11 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
indelible | 7 | {bio} |
maqview | 7 | {bio} |
melting | 7 | {bio,cloud} |
- ngs-sdk | 7 | {bio-dev} |
orthanc-webviewer | 7 | {imaging} |
+ piler | 7 | {bio} |
pymia | 7 | {imaging-dev} |
sickle | 7 | {bio} |
sigma-align | 7 | {bio-phylogeny,bio,cloud} |
- staden | 7 | {bio} |
abacas | 6 | {bio,covid-19} |
anfo | 6 | {cloud,bio} |
beads | 6 | {bio} |
@@ -69,6 +69,7 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
embassy-domalign | 6 | {cloud,bio} |
gatb-core | 6 | {bio} |
king-probe | 6 | {bio} |
+ libminc | 6 | {imaging-dev} |
mapsembler2 | 6 | {bio,cloud} |
mrs | 6 | {bio} |
neobio | 6 | {cloud,bio} |
@@ -83,13 +84,13 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
pscan-tfbs | 6 | {bio} |
rtax | 6 | {bio,cloud} |
saint | 6 | {bio} |
- seer | 6 | {bio} |
seqtools | 6 | {bio} |
snap-aligner | 6 | {bio} |
soapsnp | 6 | {bio} |
squizz | 6 | {cloud,bio} |
transtermhp | 6 | {bio} |
treeview | 6 | {bio,bio-phylogeny} |
+ vsearch | 6 | {bio,covid-19} |
zalign | 6 | {bio,cloud} |
assemblytics | 5 | {bio} |
baitfisher | 5 | {bio} |
@@ -110,7 +111,6 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
ipig | 5 | {bio} |
jellyfish1 | 5 | {bio} |
lagan | 5 | {bio} |
- libminc | 5 | {imaging-dev} |
libncl | 5 | {bio} |
microbegps | 5 | {bio} |
mlv-smile | 5 | {cloud,bio} |
@@ -133,7 +133,6 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
sga | 5 | {bio} |
spread-phy | 5 | {bio,bio-phylogeny} |
tracetuner | 5 | {bio} |
- vsearch | 5 | {bio,covid-19} |
yaha | 5 | {bio} |
bart-view | 4 | {imaging} |
canu | 4 | {bio} |
@@ -194,12 +193,10 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
blimps | 2 | {bio} |
busco | 2 | {covid-19,bio} |
emboss-explorer | 2 | {bio} |
- kma | 2 | {bio} |
libbio-mage-utils-perl | 2 | {bio-dev} |
libsbml | 2 | {bio-dev} |
mencal | 2 | {tools} |
ngs-sdk | 2 | {bio-dev} |
- oscar | 2 | {practice,data,tools} |
papyrus | 2 | {imaging-dev} |
relion | 2 | {bio} |
sift | 2 | {bio} |
@@ -209,15 +206,16 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
ctn | 1 | {imaging-dev} |
embassy-phylip | 1 | {cloud,bio} |
gatb-core | 1 | {bio-dev} |
+ kma | 1 | {bio} |
kmerresistance | 1 | {bio} |
libchado-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
- libgff | 1 | {bio-dev} |
libmialm | 1 | {imaging-dev} |
libvistaio | 1 | {imaging-dev} |
libxdf | 1 | {imaging-dev} |
murasaki | 1 | {bio} |
opensurgsim | 1 | {imaging-dev} |
+ oscar | 1 | {practice,data,tools} |
python-py2bit | 1 | {bio,bio-dev} |
python-scitrack | 1 | {covid-19} |
relion | 1 | {bio} |
@@ -296,5 +294,5 @@ Last-Update: Wed, 03 Jun 2020 01:42:04 +0000
bustools | -1 | {covid-19,bio} |
cat-bat | -1 | {covid-19,bio} |
flash | -1 | {bio,covid-19} |
-(323 rows)
+(321 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/74a53e2e90b44a99b62defb6e26820eb531f2ba9
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/74a53e2e90b44a99b62defb6e26820eb531f2ba9
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