[med-svn] [Git][med-team/diamond-aligner][master] 4 commits: routine-update: New upstream version

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / diamond-aligner


Commits:
3fbfc6eb by Andreas Tille at 2020-06-20T15:44:19+02:00
routine-update: New upstream version

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72555af9 by Andreas Tille at 2020-06-20T15:44:20+02:00
New upstream version 0.9.35
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6c49df56 by Andreas Tille at 2020-06-20T15:44:23+02:00
Update upstream source from tag 'upstream/0.9.35'

Update to upstream version '0.9.35'
with Debian dir 69df4cb937d9a39a384d5c0833781a3a61019ddb
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956d72c9 by Andreas Tille at 2020-06-20T15:49:22+02:00
routine-update: Ready to upload to unstable

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30 changed files:

- .travis.yml
- CMakeLists.txt
- debian/changelog
- src/ChangeLog
- src/align/align.cpp
- src/align/align.h
- src/align/extend.cpp
- src/align/extend.h
- src/align/gapped.cpp
- src/align/gapped_filter.cpp
- src/align/legacy/query_mapper.cpp
- src/align/legacy/query_mapper.h
- src/align/legacy/swipe_pipeline.cpp
- src/align/target.h
- src/align/ungapped.cpp
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/masking.h
- src/basic/match.h
- src/basic/packed_loc.h
- src/basic/parameters.h
- src/basic/score_matrix.cpp
- src/basic/score_matrix.h
- src/basic/seed.h
- src/basic/statistics.h
- src/basic/value.cpp
- src/basic/value.h
- + src/cluster/cluster.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/ec27f76348b4aaf195a9cc78bd09ca5b017ba3ba...956d72c96a7d695c410ff593eb8efc88e74c450e

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View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/ec27f76348b4aaf195a9cc78bd09ca5b017ba3ba...956d72c96a7d695c410ff593eb8efc88e74c450e
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