[med-svn] [Git][med-team/mindthegap][master] 2 commits: New upstream version 2.2.2

[Shayan Doust]

Shayan Doust pushed to branch master at Debian Med / mindthegap


Commits:
84b0bcd5 by Shayan Doust at 2020-06-21T17:01:10+01:00
New upstream version 2.2.2
- - - - -
8d91b0c7 by Shayan Doust at 2020-06-21T17:01:14+01:00
Update upstream source from tag 'upstream/2.2.2'

Update to upstream version '2.2.2'
with Debian dir ed1fb9185e121485e53257dd8febeda9472b67e4
- - - - -


30 changed files:

- .gitignore
- CHANGELOG.md
- CMakeLists.txt
- README.md
- + container/Dockerfile
- + container/MTG_recipes
- + container/README.txt
- + data/regions.bed
- + doc/MindTheGap_assembly.md
- + doc/MindTheGap_insertion_caller.md
- + scripts/python3/Context_genome_WG.py
- + scripts/python3/Inser_snp_in_ref.py
- + scripts/python3/README.txt
- + scripts/script_human_analysis/Context_genome_WG.py
- + scripts/script_human_analysis/Inser_snp_in_ref.py
- + scripts/script_human_analysis/README.txt
- src/CircularBuffer.hpp
- src/Filler.cpp
- src/Filler.hpp
- src/FindBreakpoints.hpp
- src/FindHeteroInsertion.hpp
- src/FindInsertion.hpp
- src/FindSNP.hpp
- src/Finder.cpp
- src/Finder.hpp
- src/GraphAnalysis.cpp
- src/GraphAnalysis.hpp
- src/IFindObserver.hpp
- src/main.cpp
- + src/nwAlign/nwalign.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/mindthegap/-/compare/ace57140ca18922435881327aeb330664717aa12...8d91b0c78295095ab94121978e603c0730c9e40c

-- 
View it on GitLab: https://salsa.debian.org/med-team/mindthegap/-/compare/ace57140ca18922435881327aeb330664717aa12...8d91b0c78295095ab94121978e603c0730c9e40c
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200621/eb411851/attachment.html>