[med-svn] [Git][med-team/rna-star][master] 4 commits: New upstream version 2.7.5a+dfsg

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / rna-star


Commits:
87d2fc43 by Steffen Moeller at 2020-06-27T17:10:17+02:00
New upstream version 2.7.5a+dfsg
- - - - -
4b0e652a by Steffen Moeller at 2020-06-27T17:10:17+02:00
routine-update: New upstream version

- - - - -
849b9b91 by Steffen Moeller at 2020-06-27T17:10:18+02:00
Update upstream source from tag 'upstream/2.7.5a+dfsg'

Update to upstream version '2.7.5a+dfsg'
with Debian dir 89686db20ebee91b1502794f2a099d9780456efe
- - - - -
f09a8cd5 by Steffen Moeller at 2020-06-27T17:31:12+02:00
New upstream version that sadly FTBFS

- - - - -


27 changed files:

- CHANGES.md
- README.md
- RELEASEnotes.md
- debian/changelog
- debian/patches/donotuse_own_htslib.patch
- + debian/patches/mathRoutinesNotInScope.patch
- debian/patches/reproducible.patch
- debian/patches/series
- doc/STARmanual.pdf
- docs/STARsolo.md
- extras/doc-latex/STARmanual.tex
- extras/doc-latex/convertParDefToLatexTable.awk
- extras/doc-latex/parametersDefault.tex
- extras/docker/Dockerfile
- extras/scripts/soloBasicCellFilter.awk
- source/BAMbinSortUnmapped.cpp
- source/ChimericDetection.cpp
- source/ChimericDetection.h
- source/ErrorWarning.cpp
- + source/GTF.cpp
- + source/GTF.h
- + source/GTF_superTranscript.cpp
- source/loadGTF.cpp → source/GTF_transcriptGeneSJ.cpp
- source/Genome.cpp
- source/Genome.h
- + source/Genome_consensusSequence.cpp
- source/Genome_genomeGenerate.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/rna-star/-/compare/af6e03a425039bbe0ebc711710ba66383cbb2b06...f09a8cd56a2c215049b9cf14b3124a46130d295a

-- 
View it on GitLab: https://salsa.debian.org/med-team/rna-star/-/compare/af6e03a425039bbe0ebc711710ba66383cbb2b06...f09a8cd56a2c215049b9cf14b3124a46130d295a
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200627/96843e0e/attachment.html>