[med-svn] [Git][med-team/salmon][upstream] New upstream version 1.1.0+ds1

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / salmon


Commits:
ac6af4db by Michael R. Crusoe at 2020-02-28T17:04:26+01:00
New upstream version 1.1.0+ds1
- - - - -


30 changed files:

- CMakeLists.txt
- README.md
- cmake/SimpleTest.cmake
- current_version.txt
- doc/source/alevin.rst
- doc/source/conf.py
- doc/steps_to_prepare_release.md
- docker/Dockerfile
- docker/build_test.sh
- include/AlevinHash.hpp
- include/AlevinOpts.hpp
- include/AlevinUtils.hpp
- include/BarcodeModel.hpp
- include/CollapsedCellOptimizer.hpp
- include/DedupUMI.hpp
- − include/Filter.hpp
- include/GZipWriter.hpp
- include/ReadExperiment.hpp
- include/SalmonConfig.hpp
- include/SalmonDefaults.hpp
- include/SalmonIndex.hpp
- include/SalmonMappingUtils.hpp
- include/SalmonOpts.hpp
- scripts/fetchPufferfish.sh
- src/Alevin.cpp
- src/AlevinHash.cpp
- src/AlevinUtils.cpp
- src/BuildSalmonIndex.cpp
- src/CMakeLists.txt
- src/CollapsedCellOptimizer.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/salmon/-/commit/ac6af4dba73ed24ff8a510dc148c04d81693fd33

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View it on GitLab: https://salsa.debian.org/med-team/salmon/-/commit/ac6af4dba73ed24ff8a510dc148c04d81693fd33
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