[med-svn] [Git][med-team/trinityrnaseq][upstream] New upstream version 2.8.6+dfsg

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / trinityrnaseq


Commits:
2831268b by Michael R. Crusoe at 2019-10-14T10:49:01+02:00
New upstream version 2.8.6+dfsg
- - - - -


22 changed files:

- + .gitignore
- + .travis.yml
- Analysis/DifferentialExpression/GOplot.Rscript
- Analysis/DifferentialExpression/PtR
- + Analysis/DifferentialExpression/add_annotations_to_GO_and_lengths_file.R
- Analysis/DifferentialExpression/analyze_diff_expr.pl
- Analysis/DifferentialExpression/prep_n_run_GOplot.pl
- Analysis/DifferentialExpression/run_DE_analysis.pl
- Analysis/SuperTranscripts/AllelicVariants/run_variant_calling.py
- Analysis/SuperTranscripts/Trinity_gene_splice_modeler.py
- + Analysis/SuperTranscripts/pylib/Compact_graph_pruner.py
- Analysis/SuperTranscripts/pylib/Compact_graph_whole.py
- Analysis/SuperTranscripts/pylib/Node_alignment.py
- Analysis/SuperTranscripts/pylib/Splice_model_refiner.py
- Analysis/SuperTranscripts/pylib/TGraph.py
- Analysis/SuperTranscripts/pylib/TNode.py
- Analysis/SuperTranscripts/pylib/Trinity_fasta_parser.py
- Butterfly/src/src/Path.java
- Butterfly/src/src/TransAssembly_allProbPaths.java
- Changelog.txt
- + Chrysalis/CMakeLists.txt
- − Chrysalis/GraphFromFasta_MPI.cc


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/trinityrnaseq/-/commit/2831268b90d9ea99c0ed222ded5b2e543086b78d

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