[med-svn] [Git][med-team/tnseq-transit][master] 7 commits: routine-update: New upstream version

[Steffen Möller]

Steffen Möller pushed to branch master at Debian Med / tnseq-transit


Commits:
27ce0cff by Steffen Moeller at 2020-05-23T18:43:54+02:00
routine-update: New upstream version

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4038db1d by Steffen Moeller at 2020-05-23T18:43:55+02:00
New upstream version 3.1.0
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28cd9e47 by Steffen Moeller at 2020-05-23T18:46:11+02:00
Update upstream source from tag 'upstream/3.1.0'

Update to upstream version '3.1.0'
with Debian dir d1ae56156225ad351dffee604d8bf7203f35f200
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617d901d by Steffen Moeller at 2020-05-23T18:46:11+02:00
routine-update: Standards-Version: 4.5.0

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857d4d08 by Steffen Moeller at 2020-05-23T18:46:14+02:00
routine-update: Add salsa-ci file

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2128b95b by Steffen Moeller at 2020-05-23T18:46:15+02:00
routine-update: Rules-Requires-Root: no

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77778927 by Steffen Moeller at 2020-05-23T18:47:28+02:00
routine-update: Ready to upload to unstable

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30 changed files:

- CHANGELOG.md
- debian/changelog
- debian/control
- + debian/salsa-ci.yml
- src/pytpp/tpp_tools.py
- src/pytransit/__init__.py
- src/pytransit/analysis/__init__.py
- src/pytransit/analysis/anova.py
- src/pytransit/analysis/base.py
- src/pytransit/analysis/binomial.py
- + src/pytransit/analysis/corrplot.py
- src/pytransit/analysis/example.py
- src/pytransit/analysis/gi.py
- src/pytransit/analysis/griffin.py
- src/pytransit/analysis/gumbel.py
- + src/pytransit/analysis/heatmap.py
- src/pytransit/analysis/hmm.py
- src/pytransit/analysis/norm.py
- src/pytransit/analysis/normalize.py
- src/pytransit/analysis/pathway_enrichment.py
- src/pytransit/analysis/rankproduct.py
- src/pytransit/analysis/resampling.py
- src/pytransit/analysis/tn5gaps.py
- src/pytransit/analysis/tnseq_stats.py
- src/pytransit/analysis/utest.py
- src/pytransit/analysis/zinb.py
- src/pytransit/convert/gff_to_prot_table.py
- + src/pytransit/data/COG_roles.dat
- + src/pytransit/data/GO_term_names.dat
- + src/pytransit/data/H37Rv_COG_roles.dat


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/tnseq-transit/-/compare/d7ccdd9735cc8f7f7e72ff9874a5015c50a86889...77778927d429cad6fa707508ae5d561d388fccb7

-- 
View it on GitLab: https://salsa.debian.org/med-team/tnseq-transit/-/compare/d7ccdd9735cc8f7f7e72ff9874a5015c50a86889...77778927d429cad6fa707508ae5d561d388fccb7
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