[med-svn] [Git][med-team/vg][master] 5 commits: routine-update: New upstream version

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / vg


Commits:
3cbd8f5d by Michael R. Crusoe at 2020-05-23T13:56:13+02:00
routine-update: New upstream version

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37e7de41 by Michael R. Crusoe at 2020-05-23T13:56:16+02:00
New upstream version 1.24.0+ds
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d0f2b7b4 by Michael R. Crusoe at 2020-05-23T14:00:05+02:00
Update upstream source from tag 'upstream/1.24.0+ds'

Update to upstream version '1.24.0+ds'
with Debian dir 7b4bf89271563217739fec18557bf3fa4cdf514d
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9844728c by Michael R. Crusoe at 2020-05-23T14:37:06+02:00
Refreshed patches

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09366f2a by Michael R. Crusoe at 2020-05-23T19:39:02+02:00
release 1.24.0+ds-1 to unstable

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30 changed files:

- Dockerfile
- Doxyfile
- Makefile
- debian/changelog
- debian/patches/crossbuild
- debian/patches/simde
- debian/patches/spelling
- debian/patches/use_packaged_fastahack
- debian/patches/use_packaged_smithwaterman
- debian/patches/use_packaged_vcflib
- deps/dozeu/dozeu.h
- deps/gbwt/README.md
- deps/gbwt/cached_gbwt.cpp
- deps/gbwtgraph/.gitignore
- deps/gbwtgraph/CMakeLists.txt
- deps/gbwtgraph/Makefile
- + deps/gbwtgraph/algorithms.cpp
- + deps/gbwtgraph/cached_gbwtgraph.cpp
- deps/gbwtgraph/gbwtgraph.cpp
- + deps/gbwtgraph/include/gbwtgraph/algorithms.h
- + deps/gbwtgraph/include/gbwtgraph/cached_gbwtgraph.h
- deps/gbwtgraph/include/gbwtgraph/gbwtgraph.h
- deps/gbwtgraph/include/gbwtgraph/index.h
- deps/gbwtgraph/include/gbwtgraph/io.h
- deps/gbwtgraph/include/gbwtgraph/minimizer.h
- deps/gbwtgraph/include/gbwtgraph/path_cover.h
- deps/gbwtgraph/include/gbwtgraph/utils.h
- deps/gbwtgraph/minimizer.cpp
- deps/gbwtgraph/path_cover.cpp
- deps/gbwtgraph/tests/Makefile


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/vg/-/compare/bc3d18ce90daab042045b5ebdecc0fe52790d819...09366f2a3190b3a004bbcc70e9e7a32816cb4f0e

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View it on GitLab: https://salsa.debian.org/med-team/vg/-/compare/bc3d18ce90daab042045b5ebdecc0fe52790d819...09366f2a3190b3a004bbcc70e9e7a32816cb4f0e
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