[med-svn] [Git][med-team/kalign][master] 9 commits: debian/watch: fix syntax

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / kalign


Commits:
5ffa6aaf by Michael R. Crusoe at 2020-11-06T09:32:12+01:00
debian/watch: fix syntax

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c89a2e5a by Michael R. Crusoe at 2020-11-06T09:32:20+01:00
routine-update: New upstream version

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abbae427 by Michael R. Crusoe at 2020-11-06T09:32:21+01:00
New upstream version 3.3
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29957e29 by Michael R. Crusoe at 2020-11-06T09:32:23+01:00
Update upstream source from tag 'upstream/3.3'

Update to upstream version '3.3'
with Debian dir e53db3a9b69c083ee80f6ffad3fc94011e8dd591
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b3d2e74a by Michael R. Crusoe at 2020-11-06T10:34:35+01:00
refresh patches; drop "hardening", it was applied upstream.

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d90f3adc by Michael R. Crusoe at 2020-11-06T10:34:36+01:00
fix missing epoch

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ac8cb19f by Michael R. Crusoe at 2020-11-06T10:34:36+01:00
simplify SIMD loops

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8cecf076 by Michael R. Crusoe at 2020-11-06T10:34:36+01:00
Added a patch to retain debugging symbols

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7f09e4a8 by Michael R. Crusoe at 2020-11-06T10:40:38+01:00
routine-update: Ready to upload to unstable

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30 changed files:

- .github/workflows/ccpp.yml
- + .github/workflows/codeql-analysis.yml
- ChangeLog
- README.md
- configure.ac
- debian/changelog
- − debian/patches/fix-gcc10-build.patch
- − debian/patches/hardening
- + debian/patches/keep-debugging
- debian/patches/no-native-build
- debian/patches/series
- debian/patches/simde
- debian/rules
- debian/watch
- dev/Makefile.am
- + dev/data/BB11001_EOF.msf
- + dev/data/README~
- dev/run_aln_test.sh
- dev/run_io_test.sh
- m4/ax_set_compile_flags.m4
- scripts/benchmark.org
- src/Makefile.am
- src/alignment.c
- src/alignment_parameters.c
- src/alignment_parameters.h
- + src/aln_controller.c
- + src/aln_controller.h
- + src/aln_mem.c
- + src/aln_mem.h
- + src/aln_profileprofile.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/kalign/-/compare/7fd698a594e1efaf84ac2fcde7c9f68a0b226418...7f09e4a8a36312fad5c8e9fc9dba49f7ce6d87b1

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View it on GitLab: https://salsa.debian.org/med-team/kalign/-/compare/7fd698a594e1efaf84ac2fcde7c9f68a0b226418...7f09e4a8a36312fad5c8e9fc9dba49f7ce6d87b1
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