[med-svn] [Git][med-team/libmaus2][upstream] New upstream version 2.0.766+dfsg

[Étienne Mollier]

Étienne Mollier pushed to branch upstream at Debian Med / libmaus2


Commits:
69e4d571 by Étienne Mollier at 2020-11-17T19:35:57+01:00
New upstream version 2.0.766+dfsg
- - - - -


30 changed files:

- ChangeLog
- configure.ac
- src/Makefile.am
- src/libmaus2/StaticInitialization.cpp
- src/libmaus2/aio/CircularBuffer.hpp
- src/libmaus2/aio/CompactEncoder4.hpp
- src/libmaus2/aio/FileFragment.hpp
- src/libmaus2/aio/GetLength.hpp
- src/libmaus2/aio/InputStreamInstanceAtOffset.hpp
- src/libmaus2/util/CommandContainer.cpp → src/libmaus2/aio/SecrecyCache.hpp
- src/libmaus2/aio/SecrecyInputStreamFactory.cpp
- src/libmaus2/aio/SecrecyOutputStreamFactory.cpp
- src/libmaus2/aio/SynchronousGenericOutput.hpp
- src/libmaus2/aio/URLObject.hpp
- src/libmaus2/autoarray/AutoArray.hpp
- src/libmaus2/bambam/BamNumericalIndexGenerator.hpp
- src/libmaus2/bambam/ReadEndsBlockDecoderBaseCollection.hpp
- src/libmaus2/bambam/ReadEndsContainer.hpp
- src/libmaus2/bitio/CompactDecoderBuffer.hpp
- src/libmaus2/bitio/OutputBuffer.hpp
- src/libmaus2/bitio/PacDecoderBuffer.hpp
- src/libmaus2/clustering/ProduceEdgeRequest.hpp
- src/libmaus2/dazzler/align/AlignmentFileSymmetryCheck.hpp
- src/libmaus2/dazzler/align/AlignmentWriter.hpp
- src/libmaus2/dazzler/align/LasSort2.hpp
- src/libmaus2/dazzler/align/OverlapIndexer.hpp
- src/libmaus2/dazzler/align/SortingOverlapOutputBuffer.hpp
- src/libmaus2/fastx/CompactFastDecoder.hpp
- src/libmaus2/fastx/isFastQ.hpp
- src/libmaus2/gamma/SparseGammaGapBlockEncoder.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/libmaus2/-/commit/69e4d5717fff7bb4308988d526e5d8767474c3c1

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View it on GitLab: https://salsa.debian.org/med-team/libmaus2/-/commit/69e4d5717fff7bb4308988d526e5d8767474c3c1
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