[med-svn] [Git][med-team/salmon][upstream] New upstream version 1.4.0+ds1

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / salmon


Commits:
a6b0c12c by Michael R. Crusoe at 2020-11-26T16:12:51+01:00
New upstream version 1.4.0+ds1
- - - - -


30 changed files:

- CMakeLists.txt
- README.md
- current_version.txt
- + doc/salmon_logo.png
- doc/source/alevin.rst
- doc/source/conf.py
- doc/source/salmon.rst
- docker/Dockerfile
- docker/build_test.sh
- include/AlevinOpts.hpp
- include/AlevinTypes.hpp
- include/AlevinUtils.hpp
- include/BAMQueue.tpp
- include/BAMUtils.hpp
- include/FastxParserThreadUtils.hpp
- include/LibraryTypeDetector.hpp
- include/SalmonConfig.hpp
- include/SalmonDefaults.hpp
- include/SalmonOpts.hpp
- include/SalmonUtils.hpp
- include/Sampler.hpp
- include/SingleCellProtocols.hpp
- + include/peglib.h
- + include/radicl/BasicBinWriter.hpp
- + include/radicl/RADHeader.hpp
- include/spdlog/details/async_log_helper.h
- scripts/fetchPufferfish.sh
- src/Alevin.cpp
- src/AlevinHash.cpp
- src/AlevinUtils.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/salmon/-/commit/a6b0c12ceb9b37291bdc9a7e978ce65b4ce5a1f8

-- 
View it on GitLab: https://salsa.debian.org/med-team/salmon/-/commit/a6b0c12ceb9b37291bdc9a7e978ce65b4ce5a1f8
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20201126/fec68912/attachment-0001.html>