[med-svn] [Git][med-team/samtools][master] 6 commits: routine-update: New upstream version

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / samtools


Commits:
97559533 by Andreas Tille at 2020-10-01T15:54:29+02:00
routine-update: New upstream version

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eaf4eea9 by Andreas Tille at 2020-10-01T15:54:30+02:00
New upstream version 1.11
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99fb4783 by Andreas Tille at 2020-10-01T15:54:52+02:00
Update upstream source from tag 'upstream/1.11'

Update to upstream version '1.11'
with Debian dir 69670b13b9a616812f79f8edb27ef10387e05d13
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be2dde94 by Andreas Tille at 2020-10-01T15:56:33+02:00
Drop spelling patch

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0ca30e00 by Andreas Tille at 2020-10-01T16:04:34+02:00
Versioned Build-Depends: libhts-dev (>= 1.11)

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cc518eba by Andreas Tille at 2020-10-01T16:09:46+02:00
TODO: Clarify autopkgtest error

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18 changed files:

- LICENSE
- Makefile
- NEWS
- README
- + amplicon_stats.c
- bam.c
- bam.h
- bam2depth.c
- bam_addrprg.c
- + bam_ampliconclip.c
- + bam_ampliconclip.h
- bam_aux.c
- bam_color.c
- bam_fastq.c
- bam_markdup.c
- bam_mate.c
- bam_md.c
- bam_plcmd.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/samtools/-/compare/ae79f5788c56a890c8582c099b0227e1028e2a9c...cc518eba11578c569c34adadf811802dc8259f94

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View it on GitLab: https://salsa.debian.org/med-team/samtools/-/compare/ae79f5788c56a890c8582c099b0227e1028e2a9c...cc518eba11578c569c34adadf811802dc8259f94
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