[med-svn] [Git][med-team/rna-star][master] 4 commits: routine-update: New upstream version

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / rna-star


Commits:
51665654 by Andreas Tille at 2020-10-02T14:49:25+02:00
routine-update: New upstream version

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ababb9e7 by Andreas Tille at 2020-10-02T14:49:26+02:00
New upstream version 2.7.6a+dfsg
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5cd05917 by Andreas Tille at 2020-10-02T14:49:27+02:00
Update upstream source from tag 'upstream/2.7.6a+dfsg'

Update to upstream version '2.7.6a+dfsg'
with Debian dir 01da50efb2521b8e9da70f75b69c0a65ba740532
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28a40c50 by Andreas Tille at 2020-10-02T14:53:01+02:00
routine-update: Ready to upload to unstable

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30 changed files:

- CHANGES.md
- README.md
- RELEASEnotes.md
- debian/changelog
- doc/STARmanual.pdf
- extras/doc-latex/STARmanual.tex
- extras/docker/Dockerfile
- source/BAMfunctions.cpp
- source/ChimericAlign.cpp
- source/ChimericAlign.h
- + source/ChimericAlign_chimericBAMoutput.cpp
- source/ChimericDetection.h
- source/ChimericDetection_chimericDetectionMult.cpp
- source/Makefile
- source/Parameters.cpp
- source/Parameters.h
- source/ParametersChimeric_initialize.cpp
- + source/Parameters_samAttributes.cpp
- source/ReadAlign.h
- source/ReadAlignChunk.cpp
- source/ReadAlign_alignBAM.cpp
- source/ReadAlign_chimericDetection.cpp
- source/ReadAlign_chimericDetectionOldOutput.cpp
- source/ReadAlign_chimericDetectionPEmerged.cpp
- source/ReadAlign_outputAlignments.cpp
- source/ReadAlign_outputTranscriptSAM.cpp
- source/ReadAlign_peOverlapMergeMap.cpp
- source/SoloFeature_cellFiltering.cpp
- source/Transcript.h
- source/Transcript_alignScore.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/rna-star/-/compare/49decd86393295876a3eb9d337e0107e6b76279f...28a40c503b0a654b3c5a42399228454d01e913ce

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View it on GitLab: https://salsa.debian.org/med-team/rna-star/-/compare/49decd86393295876a3eb9d337e0107e6b76279f...28a40c503b0a654b3c5a42399228454d01e913ce
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