[med-svn] [Git][med-team/bowtie2][upstream] New upstream version 2.4.2

[Alexandre Mestiashvili]

Alexandre Mestiashvili pushed to branch upstream at Debian Med / bowtie2


Commits:
a45f4532 by Alexandre Mestiashvili at 2020-10-07T19:26:50+02:00
New upstream version 2.4.2
- - - - -


30 changed files:

- + .gitignore
- + .travis.yml
- + BOWTIE2_VERSION
- CMakeLists.txt
- MANUAL
- MANUAL.markdown
- Makefile
- NEWS
- README.md
- − VERSION
- aln_sink.cpp
- blockwise_sa.h
- bowtie2
- bowtie2-build
- bt2_dp.cpp
- bt2_search.cpp
- doc/manual.html
- doc/release.txt
- doc/website/manual.ssi
- doc/website/old_news.ssi
- doc/website/recent_news.ssi
- doc/website/rhsidebar.ssi
- ds.h
- opts.h
- pat.h
- processor_support.h
- sam.h
- scripts/bowtie2-hbb.sh
- scripts/sim/run.sh
- scripts/test/simple_tests.pl


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bowtie2/-/commit/a45f45328c556942a004dd3773ac51bcc7e57479

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