Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
bdc40239 by Andreas Tille at 2020-09-04T13:45:27+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,40 +1,41 @@
-Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
+Last-Update: Fri, 04 Sep 2020 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 160 | {imaging,covid-19} |
- orthanc | 90 | {practice,covid-19,imaging} |
+ orthanc | 89 | {practice,covid-19,imaging} |
orthanc-wsi | 48 | {his,laboratory,covid-19,imaging,practice,oncology} |
- gdcm | 34 | {imaging-dev} |
+ gdcm | 35 | {imaging-dev} |
dicom3tools | 26 | {imaging} |
- dicomscope | 23 | {imaging} |
- htsjdk | 22 | {bio-dev} |
+ dicomscope | 24 | {imaging} |
+ htsjdk | 24 | {bio-dev} |
gnumed-server | 19 | {covid-19,practice} |
gdcm | 16 | {covid-19,imaging} |
+ ngs-sdk | 13 | {bio-dev} |
invesalius | 12 | {imaging} |
minc-tools | 12 | {imaging} |
dcm2niix | 11 | {imaging} |
gdcm | 11 | {imaging-dev} |
- ngs-sdk | 11 | {bio-dev} |
+ adun.app | 10 | {bio} |
insighttoolkit4 | 10 | {imaging-dev} |
openslide | 10 | {imaging} |
- adun.app | 9 | {bio} |
fastlink | 9 | {bio,cloud} |
ngs-sdk | 9 | {bio-dev} |
- nifticlib | 9 | {imaging} |
nifticlib | 9 | {imaging-dev} |
+ nifticlib | 9 | {imaging} |
pixelmed | 9 | {imaging} |
treeview | 9 | {bio,bio-phylogeny} |
+ dicompyler | 8 | {oncology} |
+ ea-utils | 8 | {bio} |
librg-utils-perl | 8 | {bio} |
melting | 8 | {cloud,bio} |
obitools | 8 | {bio} |
plastimatch | 8 | {imaging} |
biosig4c++ | 7 | {physics,imaging} |
- dicompyler | 7 | {oncology} |
- ea-utils | 7 | {bio} |
king | 7 | {typesetting,imaging} |
libncl | 7 | {bio} |
orthanc-webviewer | 7 | {imaging} |
+ staden | 7 | {bio} |
biojava-live | 6 | {bio-dev} |
edtsurf | 6 | {bio} |
ipig | 6 | {bio} |
@@ -42,6 +43,7 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
libdivsufsort | 6 | {bio-dev} |
multiqc | 6 | {bio,covid-19} |
pymia | 6 | {imaging-dev} |
+ salmon | 6 | {covid-19,bio} |
vtk-dicom | 6 | {imaging} |
anfo | 5 | {cloud,bio} |
bart-view | 5 | {imaging} |
@@ -51,6 +53,7 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
librdp-taxonomy-tree-java | 5 | {bio-dev} |
mauve-aligner | 5 | {bio} |
mipe | 5 | {cloud,bio} |
+ neobio | 5 | {cloud,bio} |
orthanc-dicomweb | 5 | {covid-19,imaging} |
phast | 5 | {bio} |
phyutility | 5 | {bio,cloud} |
@@ -60,10 +63,8 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
rdp-alignment | 5 | {bio} |
rdp-classifier | 5 | {bio} |
saint | 5 | {bio} |
- salmon | 5 | {covid-19,bio} |
sibsim4 | 5 | {bio,cloud} |
spread-phy | 5 | {bio-phylogeny,bio} |
- staden | 5 | {bio} |
zalign | 5 | {cloud,bio} |
alter-sequence-alignment | 4 | {bio} |
arden | 4 | {cloud,bio} |
@@ -77,9 +78,9 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
libpal-java | 4 | {bio-dev} |
metaphlan2 | 4 | {bio} |
microbegps | 4 | {bio} |
- neobio | 4 | {cloud,bio} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
+ oscar | 4 | {data,practice,tools} |
paraclu | 4 | {bio,cloud} |
perm | 4 | {cloud,bio} |
prime-phylo | 4 | {cloud,bio} |
@@ -96,7 +97,6 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
elastix | 3 | {imaging} |
gatb-core | 3 | {bio} |
jellyfish1 | 3 | {bio} |
- lagan | 3 | {bio} |
lamarc | 3 | {bio} |
libsbml | 3 | {bio-dev} |
logol | 3 | {bio} |
@@ -104,7 +104,6 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
mrs | 3 | {bio} |
murasaki | 3 | {bio} |
nutsqlite | 3 | {tools} |
- oscar | 3 | {data,practice,tools} |
phybin | 3 | {bio} |
placnet | 3 | {bio} |
prottest | 3 | {bio,bio-phylogeny} |
@@ -129,6 +128,7 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
getdata | 2 | {bio} |
ghmm | 2 | {bio} |
hinge | 2 | {bio} |
+ lagan | 2 | {bio} |
libctapimkt | 2 | {practice} |
patman | 2 | {bio} |
pbdagcon | 2 | {bio} |
@@ -152,7 +152,7 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
emboss-explorer | 1 | {bio} |
intake | 1 | {bio-dev,bio} |
libvistaio | 1 | {imaging-dev} |
- openslide | 1 | {imaging-dev} |
+ ngs-sdk | 1 | {bio-dev} |
opensurgsim | 1 | {imaging-dev} |
q2templates | 1 | {bio} |
samblaster | 1 | {covid-19,bio} |
@@ -215,9 +215,9 @@ Last-Update: Fri, 04 Sep 2020 01:42:04 +0000
murasaki | 0 | {bio} |
nanosv | 0 | {bio,covid-19} |
ncbi-vdb | 0 | {bio-dev} |
- ngs-sdk | 0 | {bio-dev} |
nifticlib | 0 | {imaging-dev} |
opencfu | 0 | {laboratory} |
+ openslide | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
papyrus | 0 | {imaging-dev} |
parallel-fastq-dump | 0 | {covid-19} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/bdc4023979d850ffb810f83efc9c519b872ca25c
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/bdc4023979d850ffb810f83efc9c519b872ca25c
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