[med-svn] [Git][med-team/snakemake][master] 4 commits: New upstream version 5.24.1

[Rebecca N. Palmer]

Rebecca N. Palmer pushed to branch master at Debian Med / snakemake


Commits:
dbbe54b2 by Rebecca N. Palmer at 2020-09-13T15:45:04+01:00
New upstream version 5.24.1
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64520a9b by Rebecca N. Palmer at 2020-09-13T15:45:24+01:00
Update upstream source from tag 'upstream/5.24.1'

Update to upstream version '5.24.1'
with Debian dir ad7df31dd825f717322d4c53eb0f862b56ec3dbe
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ae949569 by Rebecca N. Palmer at 2020-09-13T15:57:51+01:00
Refresh patches.

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6cfd87d6 by Rebecca N. Palmer at 2020-09-13T16:46:24+01:00
Depend on python3-pulp << 2.0.

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30 changed files:

- .github/workflows/main.yml
- CHANGELOG.rst
- README.md
- debian/changelog
- debian/control
- debian/patches/0001-Use-the-inbuild-sphinx.ext.napoleon.patch
- debian/patches/0003-Compat-fix.patch
- debian/patches/0008-remove_sphinx.ext.patch
- debian/patches/local_javascript.patch
- debian/patches/python3.patch
- debian/patches/remove_ccbysa_snippets.patch
- debian/patches/workaround_sphinx_issue.patch
- docs/executing/cli.rst
- docs/executing/cloud.rst
- docs/index.rst
- docs/snakefiles/rules.rst
- docs/tutorial/additional_features.rst
- docs/tutorial/basics.rst
- docs/tutorial/setup.rst
- docs/tutorial/short.rst
- setup.py
- snakemake/__init__.py
- snakemake/_version.py
- snakemake/caching/hash.py
- snakemake/common.py
- snakemake/cwl.py
- snakemake/dag.py
- snakemake/deployment/singularity.py
- snakemake/exceptions.py
- snakemake/executors/__init__.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/a056d4757cee7ceeb9fa894d04268a56381678a2...6cfd87d6e281e3798cba6ac2919fec5cd58704e3

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View it on GitLab: https://salsa.debian.org/med-team/snakemake/-/compare/a056d4757cee7ceeb9fa894d04268a56381678a2...6cfd87d6e281e3798cba6ac2919fec5cd58704e3
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