[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Sat Sep 26 14:45:08 BST 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
aa0a3e9c by Andreas Tille at 2020-09-26T13:45:03+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,31 +1,31 @@
-Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
+Last-Update: Sat, 26 Sep 2020 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
  dcmtk                         |    162 | {imaging,covid-19}                                  | 
- orthanc                       |     88 | {practice,covid-19,imaging}                         | 
+ orthanc                       |     87 | {practice,covid-19,imaging}                         | 
  orthanc-wsi                   |     47 | {his,laboratory,covid-19,imaging,practice,oncology} | 
- gdcm                          |     39 | {imaging-dev}                                       | 
+ gdcm                          |     38 | {imaging-dev}                                       | 
  htsjdk                        |     27 | {bio-dev}                                           | 
- dicom3tools                   |     25 | {imaging}                                           | 
- dicomscope                    |     24 | {imaging}                                           | 
- gnumed-server                 |     19 | {covid-19,practice}                                 | 
- dcm2niix                      |     15 | {imaging}                                           | 
+ dicom3tools                   |     26 | {imaging}                                           | 
+ dicomscope                    |     25 | {imaging}                                           | 
+ gnumed-server                 |     18 | {covid-19,practice}                                 | 
+ dcm2niix                      |     14 | {imaging}                                           | 
  gdcm                          |     14 | {imaging-dev}                                       | 
+ gdcm                          |     14 | {covid-19,imaging}                                  | 
  ngs-sdk                       |     14 | {bio-dev}                                           | 
- adun.app                      |     13 | {bio}                                               | 
- gdcm                          |     13 | {covid-19,imaging}                                  | 
  invesalius                    |     13 | {imaging}                                           | 
+ adun.app                      |     12 | {bio}                                               | 
  melting                       |     11 | {cloud,bio}                                         | 
  minc-tools                    |     11 | {imaging}                                           | 
  dicompyler                    |     10 | {oncology}                                          | 
- nifticlib                     |     10 | {imaging-dev}                                       | 
  nifticlib                     |     10 | {imaging}                                           | 
+ nifticlib                     |     10 | {imaging-dev}                                       | 
  pixelmed                      |     10 | {imaging}                                           | 
- insighttoolkit4               |      9 | {imaging-dev}                                       | 
  libncl                        |      9 | {bio}                                               | 
  biosig4c++                    |      8 | {physics,imaging}                                   | 
  fastlink                      |      8 | {bio,cloud}                                         | 
+ insighttoolkit4               |      8 | {imaging-dev}                                       | 
  king                          |      8 | {typesetting,imaging}                               | 
  librg-utils-perl              |      8 | {bio}                                               | 
  openslide                     |      8 | {imaging}                                           | 
@@ -55,7 +55,6 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  jellyfish1                    |      6 | {bio}                                               | 
  mhap                          |      6 | {bio-ngs,bio}                                       | 
  nutsqlite                     |      6 | {tools}                                             | 
- obitools                      |      6 | {bio}                                               | 
  paraclu                       |      6 | {bio,cloud}                                         | 
  perm                          |      6 | {cloud,bio}                                         | 
  piler                         |      6 | {bio}                                               | 
@@ -82,6 +81,7 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  metaphlan2                    |      5 | {bio}                                               | 
  microbegps                    |      5 | {bio}                                               | 
  neobio                        |      5 | {cloud,bio}                                         | 
+ obitools                      |      5 | {bio}                                               | 
  orthanc-dicomweb              |      5 | {covid-19,imaging}                                  | 
  phast                         |      5 | {bio}                                               | 
  phybin                        |      5 | {bio}                                               | 
@@ -139,7 +139,6 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  seqsero                       |      3 | {bio}                                               | 
  tvc                           |      3 | {bio}                                               | 
  canu                          |      2 | {bio}                                               | 
- cufflinks                     |      2 | {bio,cloud}                                         | 
  emboss-explorer               |      2 | {bio}                                               | 
  libctapimkt                   |      2 | {practice}                                          | 
  libsbml                       |      2 | {bio-dev}                                           | 
@@ -152,7 +151,9 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  biosig4c++                    |      1 | {physics,imaging-dev}                               | 
  blimps                        |      1 | {bio}                                               | 
  cat-bat                       |      1 | {covid-19,bio}                                      | 
+ conda-package-handling        |      1 | {bio-dev,bio}                                       | 
  ctn                           |      1 | {imaging-dev}                                       | 
+ cufflinks                     |      1 | {bio,cloud}                                         | 
  embassy-phylip                |      1 | {cloud,bio}                                         | 
  emmax                         |      1 | {bio}                                               | 
  gatb-core                     |      1 | {bio-dev}                                           | 
@@ -166,6 +167,7 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  opensurgsim                   |      1 | {imaging-dev}                                       | 
  pbcopper                      |      1 | {bio-dev}                                           | 
  pilercr                       |      1 | {bio}                                               | 
+ q2templates                   |      1 | {bio}                                               | 
  relion                        |      1 | {bio}                                               | 
  seqan                         |      1 | {bio-dev}                                           | 
  sift                          |      1 | {bio}                                               | 
@@ -173,7 +175,6 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  skesa                         |      1 | {bio}                                               | 
  stringtie                     |      1 | {bio,covid-19}                                      | 
  trace2dbest                   |      1 | {bio}                                               | 
- vienna-rna                    |      1 | {covid-19,bio}                                      | 
  acedb                         |      0 | {cloud,bio}                                         | 
  bambamc                       |      0 | {bio-dev}                                           | 
  bamkit                        |      0 | {covid-19,bio}                                      | 
@@ -183,7 +184,6 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  biosyntax                     |      0 | {bio}                                               | 
  bustools                      |      0 | {bio,covid-19}                                      | 
  camp                          |      0 | {imaging-dev}                                       | 
- conda-package-handling        |      0 | {bio-dev,bio}                                       | 
  dextractor                    |      0 | {bio,covid-19}                                      | 
  fis-gtm                       |      0 | {his}                                               | 
  intake                        |      0 | {bio-dev,bio}                                       | 
@@ -227,7 +227,6 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  pbseqlib                      |      0 | {bio-dev}                                           | 
  plasmidid                     |      0 | {bio,covid-19}                                      | 
  pplacer                       |      0 | {covid-19,bio,bio-phylogeny}                        | 
- q2templates                   |      0 | {bio}                                               | 
  relion                        |      0 | {bio-dev}                                           | 
  relion                        |      0 | {bio}                                               | 
  sambamba                      |      0 | {bio}                                               | 
@@ -243,6 +242,7 @@ Last-Update: Sat, 26 Sep 2020 01:42:04 +0000
  tophat-recondition            |      0 | {bio,covid-19}                                      | 
  varna                         |      0 | {bio}                                               | 
  varscan                       |      0 | {bio,covid-19}                                      | 
+ vienna-rna                    |      0 | {covid-19,bio}                                      | 
  vtk-dicom                     |      0 | {imaging-dev}                                       | 
  yanagiba                      |      0 | {bio,covid-19}                                      | 
  mssstest                      |     -1 | {tools}                                             | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/aa0a3e9c2e0052f4e87fd2c5d6fd667c36f92503

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View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/aa0a3e9c2e0052f4e87fd2c5d6fd667c36f92503
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