[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Wed Sep 30 14:45:18 BST 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
aaf5fb39 by Andreas Tille at 2020-09-30T13:45:14+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,42 +1,42 @@
-Last-Update: Wed, 30 Sep 2020 01:42:04 +0000
+Last-Update: Wed, 30 Sep 2020 13:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk                         |    161 | {imaging,covid-19}                                  | 
- orthanc                       |     88 | {practice,covid-19,imaging}                         | 
+ dcmtk                         |    164 | {imaging,covid-19}                                  | 
+ orthanc                       |     89 | {practice,covid-19,imaging}                         | 
  orthanc-wsi                   |     48 | {his,laboratory,covid-19,imaging,practice,oncology} | 
  gdcm                          |     40 | {imaging-dev}                                       | 
- dicom3tools                   |     27 | {imaging}                                           | 
- dicomscope                    |     26 | {imaging}                                           | 
+ dicomscope                    |     27 | {imaging}                                           | 
  htsjdk                        |     26 | {bio-dev}                                           | 
+ dicom3tools                   |     25 | {imaging}                                           | 
  gnumed-server                 |     18 | {covid-19,practice}                                 | 
+ gdcm                          |     16 | {covid-19,imaging}                                  | 
  ngs-sdk                       |     16 | {bio-dev}                                           | 
- gdcm                          |     15 | {covid-19,imaging}                                  | 
- gdcm                          |     15 | {imaging-dev}                                       | 
  dcm2niix                      |     14 | {imaging}                                           | 
+ gdcm                          |     14 | {imaging-dev}                                       | 
  invesalius                    |     13 | {imaging}                                           | 
  adun.app                      |     12 | {bio}                                               | 
  minc-tools                    |     11 | {imaging}                                           | 
  nifticlib                     |     11 | {imaging}                                           | 
+ pixelmed                      |     11 | {imaging}                                           | 
  melting                       |     10 | {cloud,bio}                                         | 
- pixelmed                      |     10 | {imaging}                                           | 
- nifticlib                     |      9 | {imaging-dev}                                       | 
+ nifticlib                     |     10 | {imaging-dev}                                       | 
  plastimatch                   |      9 | {imaging}                                           | 
  fastlink                      |      8 | {bio,cloud}                                         | 
+ insighttoolkit4               |      8 | {imaging-dev}                                       | 
  libncl                        |      8 | {bio}                                               | 
  librg-utils-perl              |      8 | {bio}                                               | 
+ ngs-sdk                       |      8 | {bio-dev}                                           | 
+ openslide                     |      8 | {imaging}                                           | 
  orthanc-webviewer             |      8 | {imaging}                                           | 
  sibsim4                       |      8 | {bio,cloud}                                         | 
  stacks                        |      8 | {bio}                                               | 
  anfo                          |      7 | {cloud,bio}                                         | 
  biojava-live                  |      7 | {bio-dev}                                           | 
  biosig4c++                    |      7 | {physics,imaging}                                   | 
- insighttoolkit4               |      7 | {imaging-dev}                                       | 
  king                          |      7 | {typesetting,imaging}                               | 
  mipe                          |      7 | {cloud,bio}                                         | 
  multiqc                       |      7 | {bio,covid-19}                                      | 
- ngs-sdk                       |      7 | {bio-dev}                                           | 
- openslide                     |      7 | {imaging}                                           | 
  phyutility                    |      7 | {bio,cloud}                                         | 
  salmon                        |      7 | {covid-19,bio}                                      | 
  treeview                      |      7 | {bio,bio-phylogeny}                                 | 
@@ -50,9 +50,11 @@ Last-Update: Wed, 30 Sep 2020 01:42:04 +0000
  gatb-core                     |      6 | {bio}                                               | 
  jebl2                         |      6 | {bio-dev}                                           | 
  jellyfish1                    |      6 | {bio}                                               | 
+ libdivsufsort                 |      6 | {bio-dev}                                           | 
  paraclu                       |      6 | {bio,cloud}                                         | 
  perm                          |      6 | {cloud,bio}                                         | 
  piler                         |      6 | {bio}                                               | 
+ radiant                       |      6 | {bio}                                               | 
  saint                         |      6 | {bio}                                               | 
  spread-phy                    |      6 | {bio-phylogeny,bio}                                 | 
  staden                        |      6 | {bio}                                               | 
@@ -62,7 +64,6 @@ Last-Update: Wed, 30 Sep 2020 01:42:04 +0000
  fsm-lite                      |      5 | {bio}                                               | 
  ipig                          |      5 | {bio}                                               | 
  lagan                         |      5 | {bio}                                               | 
- libdivsufsort                 |      5 | {bio-dev}                                           | 
  librdp-taxonomy-tree-java     |      5 | {bio-dev}                                           | 
  mhap                          |      5 | {bio-ngs,bio}                                       | 
  neobio                        |      5 | {cloud,bio}                                         | 
@@ -73,7 +74,6 @@ Last-Update: Wed, 30 Sep 2020 01:42:04 +0000
  placnet                       |      5 | {bio}                                               | 
  proalign                      |      5 | {bio,bio-phylogeny}                                 | 
  pymia                         |      5 | {imaging-dev}                                       | 
- radiant                       |      5 | {bio}                                               | 
  rdp-classifier                |      5 | {bio}                                               | 
  rtax                          |      5 | {cloud,bio}                                         | 
  samblaster                    |      5 | {covid-19,bio}                                      | 
@@ -145,6 +145,7 @@ Last-Update: Wed, 30 Sep 2020 01:42:04 +0000
  opencfu                       |      2 | {laboratory}                                        | 
  openslide                     |      2 | {imaging-dev}                                       | 
  orthanc-mysql                 |      2 | {imaging}                                           | 
+ papyrus                       |      2 | {imaging-dev}                                       | 
  samtools-legacy               |      2 | {bio-dev}                                           | 
  seqan                         |      2 | {bio-dev}                                           | 
  simpleitk                     |      2 | {imaging-dev}                                       | 
@@ -166,8 +167,8 @@ Last-Update: Wed, 30 Sep 2020 01:42:04 +0000
  libseqlib                     |      1 | {bio-dev}                                           | 
  libvistaio                    |      1 | {imaging-dev}                                       | 
  murasaki                      |      1 | {bio}                                               | 
+ ngs-sdk                       |      1 | {bio-dev}                                           | 
  opensurgsim                   |      1 | {imaging-dev}                                       | 
- papyrus                       |      1 | {imaging-dev}                                       | 
  pbcopper                      |      1 | {bio-dev}                                           | 
  pilercr                       |      1 | {bio}                                               | 
  q2templates                   |      1 | {bio}                                               | 
@@ -220,15 +221,14 @@ Last-Update: Wed, 30 Sep 2020 01:42:04 +0000
  miaviewit                     |      0 | {imaging-dev}                                       | 
  milib                         |      0 | {covid-19,bio-dev}                                  | 
  nanosv                        |      0 | {bio,covid-19}                                      | 
- ngs-sdk                       |      0 | {bio-dev}                                           | 
  nifticlib                     |      0 | {imaging-dev}                                       | 
  orthanc-imagej                |      0 | {imaging}                                           | 
  parallel-fastq-dump           |      0 | {covid-19}                                          | 
  pbseqlib                      |      0 | {bio-dev}                                           | 
  plasmidid                     |      0 | {bio,covid-19}                                      | 
  pplacer                       |      0 | {covid-19,bio,bio-phylogeny}                        | 
- relion                        |      0 | {bio-dev}                                           | 
  relion                        |      0 | {bio}                                               | 
+ relion                        |      0 | {bio-dev}                                           | 
  sambamba                      |      0 | {bio}                                               | 
  sbmltoolbox                   |      0 | {bio-dev}                                           | 
  scrappie                      |      0 | {covid-19,bio}                                      | 


=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/aaf5fb39db57c966c92949672799c9d62c6292b3

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View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/aaf5fb39db57c966c92949672799c9d62c6292b3
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