[med-svn] [Git][med-team/libgoby-java][upstream] New upstream version 3.3.1+dfsg2

[Pierre Gruet (@pgt)]

Pierre Gruet pushed to branch upstream at Debian Med / libgoby-java


Commits:
687c05f7 by Pierre Gruet at 2021-08-18T10:33:39+02:00
New upstream version 3.3.1+dfsg2
- - - - -


30 changed files:

- − goby-distribution/data/annotations/methyl-cpgIsland-annotations.tsv
- − goby-distribution/data/annotations/methyl-ens-promoter-annotations.tsv
- − goby-distribution/data/biomart-mouse-exons-ensembl55-genes-NCBIM37.txt
- − goby-distribution/data/biomart-mouse-exons-ensembl57-genes-MM9.txt
- − goby-distribution/data/biomart-mouse-exons-ensembl57-genes-NCBIM37.txt
- − goby-distribution/data/biomart-mouse-transcript-exon-ensembl57-NCBIM37.txt
- − goby-distribution/data/biomart_dog_exon_ensembl57_genes_BROADD2.57.txt
- − goby-distribution/data/biomart_human_exon_esmbl52genes_NCBI36.txt
- − goby-distribution/data/biomart_human_exon_esmbl57genes_NCBI_GRCh37.txt
- − goby-distribution/data/biomart_human_gene_exon_ensembl54_NCBI_GRCh36.txt
- − goby-distribution/data/biomart_human_gene_transcript_ensembl57_NCBI_CRCh37.txt
- − goby-distribution/data/biomart_human_transcript-exon_ensembl54_NCBI36.txt
- − goby-distribution/data/biomart_human_transcript_ensembl52_NCBI36.txt
- − goby-distribution/data/gene-transcript-annotations.txt
- − goby-distribution/data/reads/goby-mouse-reads-sample.compact-reads
- − goby-distribution/data/reads/goby-mouse-reads-sample.fasta.gz
- − goby-distribution/data/reads/test-cases-variations.fasta
- − goby-distribution/data/reference/mm9/README.txt
- − goby-distribution/data/reference/mm9/chr1.compact-reads
- − goby-distribution/data/reference/mm9/chr1.fa.gz
- − goby-distribution/data/reference/test-cases-variations/test-case-references.fasta
- − goby-distribution/data/snps/sample-mouse.tsv
- − models/genotyping/1495043324474/bestScore
- − models/genotyping/1495043324474/bestscore-ComputationGraph.bin
- − models/genotyping/1495043324474/bestscore-perf-log.tsv
- − models/genotyping/1495043324474/config.properties
- − models/genotyping/1495043324474/domain.properties
- − models/genotyping/1495043324474/epochs-perf-log.tsv
- − models/genotyping/1495043324474/latest-ComputationGraph.bin
- − models/genotyping/1510204519948/bestScore


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/libgoby-java/-/commit/687c05f7f37e1127231223889b12192b91102527

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View it on GitLab: https://salsa.debian.org/med-team/libgoby-java/-/commit/687c05f7f37e1127231223889b12192b91102527
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