[med-svn] [Git][med-team/biobambam2][upstream] 2 commits: New upstream version 2.0.182+ds

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / biobambam2


Commits:
09fe9354 by Étienne Mollier at 2021-06-29T22:17:42+02:00
New upstream version 2.0.182+ds
- - - - -
7709cfd6 by Étienne Mollier at 2021-08-24T12:48:32+02:00
New upstream version 2.0.183+ds
- - - - -


30 changed files:

- ChangeLog
- configure.ac
- src/Makefile.am
- src/biobambam2/ReadHeader.cpp
- src/programs/bam12split.cpp
- src/programs/bam12strip.cpp
- + src/programs/bamadapterhistogram.cpp
- src/programs/bamalignfrac.1
- src/programs/bamauxmerge.1
- src/programs/bamauxmerge.cpp
- src/programs/bamauxmerge2.1
- src/programs/bamauxmerge2.cpp
- src/programs/bamauxsort.cpp
- src/programs/bamcollate2.1
- src/programs/bamconsensus.1
- src/programs/bamfastcat.cpp
- src/programs/bamfilteraux.cpp
- src/programs/bamfilterk.cpp
- src/programs/bamfilternames.cpp
- src/programs/bamfilterrefid.cpp
- src/programs/bamfilterrg.cpp
- src/programs/bamfixmatecoordinates.cpp
- src/programs/bamfixmateinformation.cpp
- src/programs/bamflagsplit.cpp
- src/programs/bammarkduplicates.1
- src/programs/bammarkduplicates2.1
- src/programs/bammarkduplicatesopt.1
- src/programs/bammaskflags.1
- src/programs/bammdnm.1
- src/programs/bammdnm.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/biobambam2/-/compare/2bf8b52e161a26c661591751596d25f193c31c85...7709cfd66811220bcee4b01be8a594502fa4fa1e

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View it on GitLab: https://salsa.debian.org/med-team/biobambam2/-/compare/2bf8b52e161a26c661591751596d25f193c31c85...7709cfd66811220bcee4b01be8a594502fa4fa1e
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