[med-svn] [Git][med-team/ncbi-blastplus][master] 4 commits: Start work on ncbi-blast+ 2.12.0+ds-2.

[Aaron M. Ucko (@ucko)]

Aaron M. Ucko pushed to branch master at Debian Med / ncbi-blastplus


Commits:
6d59593b by Aaron M. Ucko at 2021-12-01T23:29:34-05:00
Start work on ncbi-blast+ 2.12.0+ds-2.

- - - - -
20140be4 by Aaron M. Ucko at 2021-12-01T23:30:19-05:00
Clean up spurious release-status comment from 2.12.0+ds-1.

- - - - -
6e35cf03 by Aaron M. Ucko at 2021-12-01T23:35:52-05:00
d/p/system_mbedtls_only: Patch out use of local mbed TLS headers

... which formally rename all symbols.

- - - - -
b242407d by Aaron M. Ucko at 2021-12-01T23:36:33-05:00
Finalize ncbi-blast+ 2.12.0+ds-2 for unstable.

- - - - -


2 changed files:

- debian/changelog
- debian/patches/system_mbedtls_only


Changes:

=====================================
debian/changelog
=====================================
@@ -1,6 +1,14 @@
+ncbi-blast+ (2.12.0+ds-2) unstable; urgency=medium
+
+  * Clean up spurious release-status comment from 2.12.0+ds-1.
+  * debian/patches/system_mbedtls_only: Patch out use of local mbed TLS
+    headers, which formally rename all symbols.
+  
+ -- Aaron M. Ucko <ucko at debian.org>  Wed, 01 Dec 2021 23:36:32 -0500
+
 ncbi-blast+ (2.12.0+ds-1) unstable; urgency=medium
 
-  * New upstream release.  (NOT RELEASED YET.)
+  * New upstream release.
   * debian/patches: Update accordingly.
     - fix_lib_deps, fix_unit_tests, spelling: Formally refresh to eliminate
       fuzz.


=====================================
debian/patches/system_mbedtls_only
=====================================
@@ -1,5 +1,5 @@
 Author: Aaron M. Ucko <amu at ucko.debian.net>
-Date:   Sun Feb 3 21:43:23 2019 -0500
+Date:   Wed, 01 Dec 2021 23:33:11 -0500
 Subject: Omit convenience mbed TLS copy
 --- a/c++/src/connect/Makefile.connssl.lib
 +++ b/c++/src/connect/Makefile.connssl.lib
@@ -14,3 +14,21 @@ Subject: Omit convenience mbed TLS copy
             mbedtls/aes mbedtls/aesni mbedtls/arc4 mbedtls/asn1parse \
             mbedtls/asn1write mbedtls/base64 mbedtls/bignum mbedtls/blowfish \
             mbedtls/camellia mbedtls/ccm mbedtls/cipher mbedtls/cipher_wrap \
+--- a/c++/src/connect/connect_misc_impl.hpp
++++ b/c++/src/connect/connect_misc_impl.hpp
+@@ -30,11 +30,10 @@
+  *
+  */
+ 
+-#include "mbedtls/mbedtls/ncbicxx_rename_mbedtls.h"
+-#include "mbedtls/mbedtls/error.h"
+-#include "mbedtls/mbedtls/ctr_drbg.h"
+-#include "mbedtls/mbedtls/entropy.h"
+-#include "mbedtls/mbedtls/ssl.h"
++#include <mbedtls/error.h>
++#include <mbedtls/ctr_drbg.h>
++#include <mbedtls/entropy.h>
++#include <mbedtls/ssl.h>
+ 
+ #include <corelib/ncbimisc.hpp>
+ 



View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/-/compare/abe4801f7dee38139c6d3c38c0f4774946d53971...b242407d84ce92d703bc337ecfd05449dce6ea78

-- 
View it on GitLab: https://salsa.debian.org/med-team/ncbi-blastplus/-/compare/abe4801f7dee38139c6d3c38c0f4774946d53971...b242407d84ce92d703bc337ecfd05449dce6ea78
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