[med-svn] [Git][med-team/gubbins][upstream] New upstream version 3.0.0

[Andreas Tille]

Andreas Tille pushed to branch upstream at Debian Med / gubbins


Commits:
8fa78ea3 by Andreas Tille at 2021-02-04T22:57:48+01:00
New upstream version 3.0.0
- - - - -


24 changed files:

- + .github/workflows/build.yml
- − .travis.yml
- CHANGELOG.md
- Dockerfile
- README.md
- VERSION
- configure.ac
- + environment.yml
- install_dependencies.sh
- − obsolete_changelog
- python/Makefile.am
- + python/VERSION
- python/gubbins/ValidateFastaAlignment.py
- python/gubbins/__init__.py
- python/gubbins/common.py
- + python/gubbins/pyjar.py
- + python/gubbins/run_gubbins.py
- + python/gubbins/tests/data/bootstrapping_test.aln
- python/gubbins/tests/data/non_bi_tree.tre.expected
- python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4_2 → python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4_2_expected
- python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4 → python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_at_sequence_4_expected
- python/gubbins/tests/data/robinson_foulds_distance_tree1.tre.reroot_tree_at_midpoint_expected
- python/gubbins/tests/test_dependencies.py
- python/gubbins/tests/test_pre_process_fasta.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/gubbins/-/commit/8fa78ea3f07c27049b5d54173326dd61b99ac92d

-- 
View it on GitLab: https://salsa.debian.org/med-team/gubbins/-/commit/8fa78ea3f07c27049b5d54173326dd61b99ac92d
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20210204/69fd8c10/attachment-0001.html>