Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
5f414e2a by Andreas Tille at 2021-02-05T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,34 +1,35 @@
-Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
+Last-Update: Fri, 05 Feb 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 178 | {imaging,covid-19} |
+ dcmtk | 180 | {imaging,covid-19} |
orthanc | 95 | {practice,imaging,covid-19} |
orthanc-wsi | 52 | {laboratory,practice,his,oncology,covid-19,imaging} |
dicom3tools | 34 | {imaging} |
- gdcm | 33 | {imaging-dev} |
- amide | 30 | {imaging} |
+ gdcm | 31 | {imaging-dev} |
+ amide | 29 | {imaging} |
htsjdk | 28 | {bio-dev} |
- gdcm | 24 | {imaging,covid-19} |
- dicomscope | 23 | {imaging} |
- dcm2niix | 22 | {imaging} |
- nifticlib | 19 | {imaging} |
+ dicomscope | 24 | {imaging} |
+ gdcm | 23 | {imaging,covid-19} |
+ dcm2niix | 20 | {imaging} |
odin | 19 | {imaging,imaging-dev} |
+ nifticlib | 18 | {imaging} |
plastimatch | 16 | {imaging} |
dicomnifti | 15 | {imaging} |
- gnumed-server | 15 | {covid-19,practice} |
+ gnumed-server | 14 | {covid-19,practice} |
minc-tools | 14 | {imaging} |
pixelmed | 13 | {imaging} |
gdcm | 12 | {imaging-dev} |
king | 12 | {imaging,typesetting} |
openslide | 11 | {imaging} |
+ adun.app | 10 | {bio} |
ngs-sdk | 10 | {bio-dev} |
- adun.app | 9 | {bio} |
insighttoolkit4 | 9 | {imaging-dev} |
+ invesalius | 9 | {imaging} |
jebl2 | 9 | {bio-dev} |
+ vtk-dicom | 9 | {imaging} |
biojava-live | 8 | {bio-dev} |
ea-utils | 8 | {bio} |
- invesalius | 8 | {imaging} |
librg-utils-perl | 8 | {bio} |
mia | 8 | {imaging} |
mipe | 8 | {bio,cloud} |
@@ -36,7 +37,6 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
ngs-sdk | 8 | {bio-dev} |
nifti2dicom | 8 | {imaging} |
prime-phylo | 8 | {bio,cloud} |
- vtk-dicom | 8 | {imaging} |
biomaj3-cli | 7 | {cloud} |
bio-tradis | 7 | {bio,bio-dev} |
fastlink | 7 | {bio,cloud} |
@@ -49,7 +49,6 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
pymia | 7 | {imaging-dev} |
runcircos-gui | 7 | {bio} |
tracetuner | 7 | {bio} |
- bamkit | 6 | {covid-19,bio} |
beast-mcmc | 6 | {bio-phylogeny,bio} |
bitseq | 6 | {bio} |
ecopcr | 6 | {bio} |
@@ -61,18 +60,16 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
melting | 6 | {bio,cloud} |
perm | 6 | {cloud,bio} |
phast | 6 | {bio} |
- rambo-k | 6 | {bio} |
saint | 6 | {bio} |
- seqsero | 6 | {bio} |
spread-phy | 6 | {bio,bio-phylogeny} |
staden | 6 | {bio} |
treeview | 6 | {bio-phylogeny,bio} |
+ anfo | 5 | {cloud,bio} |
bart-view | 5 | {imaging} |
brig | 5 | {bio} |
busco | 5 | {covid-19,bio} |
clonalorigin | 5 | {bio} |
cufflinks | 5 | {cloud,bio} |
- libminc | 5 | {imaging-dev} |
libpal-java | 5 | {bio-dev} |
librdp-taxonomy-tree-java | 5 | {bio-dev} |
libsbml | 5 | {bio-dev} |
@@ -82,21 +79,26 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
pscan-chip | 5 | {bio} |
qcumber | 5 | {bio} |
quorum | 5 | {bio} |
+ rambo-k | 5 | {bio} |
rdp-alignment | 5 | {bio} |
rdp-classifier | 5 | {bio} |
- anfo | 4 | {cloud,bio} |
+ salmid | 5 | {bio} |
+ salmon | 5 | {covid-19,bio} |
+ seqsero | 5 | {bio} |
arden | 4 | {bio,cloud} |
assemblytics | 4 | {bio} |
+ bamkit | 4 | {covid-19,bio} |
canu | 4 | {bio} |
dicompyler | 4 | {oncology} |
elastix | 4 | {imaging} |
embassy-domalign | 4 | {cloud,bio} |
fastml | 4 | {bio} |
+ hinge | 4 | {bio} |
jmodeltest | 4 | {bio,bio-phylogeny} |
libdivsufsort | 4 | {bio-dev} |
+ libminc | 4 | {imaging-dev} |
mhap | 4 | {bio,bio-ngs} |
microbegps | 4 | {bio} |
- ngs-sdk | 4 | {bio-dev} |
orthanc-mysql | 4 | {imaging} |
orthanc-postgresql | 4 | {imaging} |
paraclu | 4 | {bio,cloud} |
@@ -104,8 +106,6 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
phyutility | 4 | {bio,cloud} |
proalign | 4 | {bio,bio-phylogeny} |
rtax | 4 | {bio,cloud} |
- salmid | 4 | {bio} |
- salmon | 4 | {covid-19,bio} |
sibsim4 | 4 | {cloud,bio} |
sight | 4 | {imaging} |
soapsnp | 4 | {bio} |
@@ -121,10 +121,9 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
delly | 3 | {bio,covid-19} |
fsm-lite | 3 | {bio} |
getdata | 3 | {bio} |
- hinge | 3 | {bio} |
ipig | 3 | {bio} |
logol | 3 | {bio} |
- nifticlib | 3 | {imaging-dev} |
+ ngs-sdk | 3 | {bio-dev} |
placnet | 3 | {bio} |
plasmidseeker | 3 | {bio} |
samblaster | 3 | {covid-19,bio} |
@@ -140,6 +139,7 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
gatb-core | 2 | {bio} |
libmuscle | 2 | {bio-dev} |
metaphlan2 | 2 | {bio} |
+ nifticlib | 2 | {imaging-dev} |
openslide | 2 | {imaging-dev} |
oscar | 2 | {data,tools,practice} |
python-bcbio-gff | 2 | {bio-dev} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5f414e2a258c4dd887d248164f0b4139a320f408
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5f414e2a258c4dd887d248164f0b4139a320f408
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