[med-svn] [Git][med-team/libmaus2][upstream] New upstream version 2.0.791+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / libmaus2


Commits:
945a455b by Étienne Mollier at 2021-06-27T09:55:26+02:00
New upstream version 2.0.791+dfsg
- - - - -


30 changed files:

- ChangeLog
- configure.ac
- contrib/build_igzip.sh
- libmaus2.pc.in
- src/Makefile.am
- src/libmaus2/LibMausConfig.hpp.in
- src/libmaus2/aio/CircularBuffer.hpp
- src/libmaus2/aio/CircularWrapper.hpp
- src/libmaus2/aio/OutputStreamFactoryContainer.hpp
- src/libmaus2/autoarray/AutoArray.hpp
- src/libmaus2/bambam/BamAlignment.hpp
- src/libmaus2/bambam/BamAlignmentDecoderBase.hpp
- src/libmaus2/bambam/BamAlignmentDecoderFactory.hpp
- src/libmaus2/bambam/BamAlignmentDecoderInfo.hpp
- src/libmaus2/bambam/BamAlignmentReg2Bin.hpp
- src/libmaus2/bambam/BamHeaderLowMem.hpp
- src/libmaus2/bambam/HeaderLine.hpp
- src/libmaus2/bambam/Scram.c
- src/libmaus2/bambam/Scram.h
- src/libmaus2/bambam/ScramDecoder.hpp
- + src/libmaus2/bed/BED.hpp
- src/libmaus2/fastx/FastABgzfIndex.hpp
- src/libmaus2/gtf/GTFData.hpp
- src/libmaus2/lcs/AlignmentPrint.hpp
- src/libmaus2/lcs/AlignmentTraceContainer.hpp
- + src/libmaus2/lcs/NPLSelf.hpp
- + src/libmaus2/lz/BgzfChunkInputStream.hpp
- + src/libmaus2/lz/BgzfChunkInputStreamBuffer.hpp
- src/libmaus2/lz/BgzfInflate.hpp
- src/libmaus2/lz/BgzfInflateBase.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/libmaus2/-/commit/945a455b59eb28308d85d40ba5c06212687b217a

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View it on GitLab: https://salsa.debian.org/med-team/libmaus2/-/commit/945a455b59eb28308d85d40ba5c06212687b217a
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