Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
3ac0ca67 by Andreas Tille at 2021-05-27T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,21 +1,20 @@
-Last-Update: Thu, 27 May 2021 01:42:04 +0000
+Last-Update: Thu, 27 May 2021 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 172 | {imaging,covid-19} |
- orthanc | 91 | {practice,imaging,covid-19} |
- gdcm | 50 | {imaging-dev} |
- orthanc-wsi | 48 | {oncology,his,imaging,covid-19,practice,laboratory} |
+ dcmtk | 176 | {imaging,covid-19} |
+ orthanc | 94 | {practice,imaging,covid-19} |
+ orthanc-wsi | 50 | {oncology,his,imaging,covid-19,practice,laboratory} |
+ gdcm | 49 | {imaging-dev} |
+ htsjdk | 30 | {bio-dev} |
dicom3tools | 29 | {imaging} |
- htsjdk | 29 | {bio-dev} |
amide | 28 | {imaging} |
- dicomscope | 27 | {imaging} |
- nipype | 27 | {imaging,imaging-dev} |
- dcm2niix | 21 | {imaging} |
- gdcm | 20 | {imaging,covid-19} |
+ dicomscope | 26 | {imaging} |
+ dcm2niix | 22 | {imaging} |
gdcm | 20 | {imaging-dev} |
+ gdcm | 20 | {imaging,covid-19} |
openslide | 20 | {imaging} |
- minc-tools | 16 | {imaging} |
+ minc-tools | 17 | {imaging} |
odin | 16 | {imaging-dev,imaging} |
gnumed-server | 15 | {covid-19,practice} |
invesalius | 14 | {imaging} |
@@ -24,27 +23,29 @@ Last-Update: Thu, 27 May 2021 01:42:04 +0000
dicomnifti | 12 | {imaging} |
ngs-sdk | 12 | {bio-dev} |
pixelmed | 12 | {imaging} |
+ insighttoolkit4 | 10 | {imaging-dev} |
plastimatch | 10 | {imaging} |
vtk-dicom | 10 | {imaging} |
- insighttoolkit4 | 9 | {imaging-dev} |
+ adun.app | 9 | {bio} |
king | 9 | {imaging,typesetting} |
ngs-sdk | 9 | {bio-dev} |
- adun.app | 8 | {bio} |
mia | 8 | {imaging} |
+ ngs-sdk | 8 | {bio-dev} |
nifti2dicom | 8 | {imaging} |
- openslide | 8 | {imaging-dev} |
- bamkit | 7 | {bio,covid-19} |
dicompyler | 7 | {oncology} |
nifti2dicom | 7 | {imaging} |
+ nipype | 7 | {imaging,imaging-dev} |
+ openslide | 7 | {imaging-dev} |
bart-view | 5 | {imaging} |
busco | 5 | {covid-19,bio} |
melting | 5 | {cloud,bio} |
orthanc-dicomweb | 5 | {imaging,covid-19} |
+ salmid | 5 | {bio} |
+ bamkit | 4 | {bio,covid-19} |
libminc | 4 | {imaging-dev} |
orthanc-postgresql | 4 | {imaging} |
oscar | 4 | {tools,practice,data} |
pymia | 4 | {imaging-dev} |
- salmid | 4 | {bio} |
salmon | 4 | {covid-19,bio} |
treeview | 4 | {bio-phylogeny,bio} |
biojava-live | 3 | {bio-dev} |
@@ -71,11 +72,11 @@ Last-Update: Thu, 27 May 2021 01:42:04 +0000
embassy-domalign | 2 | {cloud,bio} |
ghmm | 2 | {bio} |
lamarc | 2 | {bio} |
+ libdivsufsort | 2 | {bio-dev} |
logol | 2 | {bio} |
obitools | 2 | {bio} |
orthanc-gdcm | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
- plasmidid | 2 | {covid-19,bio} |
sift | 2 | {bio} |
sight | 2 | {imaging} |
anfo | 1 | {cloud,bio} |
@@ -96,7 +97,6 @@ Last-Update: Thu, 27 May 2021 01:42:04 +0000
fastml | 1 | {bio} |
intake | 1 | {bio-dev,bio} |
ipig | 1 | {bio} |
- libdivsufsort | 1 | {bio-dev} |
libmuscle | 1 | {bio-dev} |
libncl | 1 | {bio} |
libvistaio | 1 | {imaging-dev} |
@@ -114,7 +114,6 @@ Last-Update: Thu, 27 May 2021 01:42:04 +0000
python-bcbio-gff | 1 | {bio-dev} |
qcumber | 1 | {bio} |
quorum | 1 | {bio} |
- rambo-k | 1 | {bio} |
saint | 1 | {bio} |
sambamba | 1 | {bio} |
samtools-legacy | 1 | {bio-dev} |
@@ -166,7 +165,6 @@ Last-Update: Thu, 27 May 2021 01:42:04 +0000
libhmsbeagle | 0 | {bio-dev} |
libics | 0 | {covid-19,imaging-dev} |
libjloda-java | 0 | {bio-dev} |
- libmaus2 | 0 | {bio-dev,covid-19} |
libmems | 0 | {bio-dev} |
libmialm | 0 | {imaging-dev} |
libncl | 0 | {bio-dev} |
@@ -196,15 +194,16 @@ Last-Update: Thu, 27 May 2021 01:42:04 +0000
pigx-rnaseq | 0 | {bio,covid-19} |
piler | 0 | {bio} |
pilercr | 0 | {bio} |
+ plasmidid | 0 | {covid-19,bio} |
plasmidseeker | 0 | {bio} |
pplacer | 0 | {bio,covid-19,bio-phylogeny} |
proalign | 0 | {bio-phylogeny,bio} |
pscan-chip | 0 | {bio} |
python-epimodels | 0 | {epi} |
python-seqcluster | 0 | {covid-19,bio-dev} |
- python-seqcluster | 0 | {bio} |
python-wdlparse | 0 | {bio-dev} |
q2-sample-classifier | 0 | {bio,bio-dev} |
+ rambo-k | 0 | {bio} |
rdp-alignment | 0 | {bio} |
rdp-classifier | 0 | {bio} |
resfinder-db | 0 | {bio} |
@@ -237,7 +236,9 @@ Last-Update: Thu, 27 May 2021 01:42:04 +0000
yaha | 0 | {bio} |
yanagiba | 0 | {covid-19,bio} |
zalign | 0 | {cloud,bio} |
+ libmaus2 | -1 | {bio-dev,covid-19} |
mssstest | -1 | {tools} |
+ python-seqcluster | -1 | {bio} |
sight | -1 | {imaging-dev} |
-(269 rows)
+(270 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/3ac0ca672c5480f5227acc093e1ba397238dae0d
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/3ac0ca672c5480f5227acc093e1ba397238dae0d
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