Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
65ef10cf by Andreas Tille at 2021-11-04T01:47:53+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,10 +1,10 @@
-Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
+Last-Update: Thu, 04 Nov 2021 01:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 179 | {imaging,covid-19} |
+ dcmtk | 179 | {covid-19,imaging} |
orthanc | 102 | {imaging,covid-19,practice} |
- orthanc-wsi | 55 | {imaging,covid-19,laboratory,oncology,practice,his} |
+ orthanc-wsi | 55 | {imaging,practice,oncology,laboratory,his,covid-19} |
htsjdk | 30 | {bio-dev} |
nipype | 29 | {imaging,imaging-dev} |
gdcm | 27 | {imaging-dev} |
@@ -19,8 +19,8 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
minc-tools | 15 | {imaging} |
orthanc-webviewer | 15 | {imaging} |
gdcm | 13 | {imaging-dev} |
- gdcm | 12 | {covid-19,imaging} |
- gnumed-server | 12 | {covid-19,practice} |
+ gdcm | 12 | {imaging,covid-19} |
+ gnumed-server | 12 | {practice,covid-19} |
dicomnifti | 11 | {imaging} |
insighttoolkit4 | 11 | {imaging-dev} |
ngs-sdk | 11 | {bio-dev} |
@@ -29,10 +29,10 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
adun.app | 10 | {bio} |
nifti2dicom | 10 | {imaging} |
mia | 9 | {imaging} |
- salmon | 9 | {covid-19,bio} |
- orthanc-dicomweb | 8 | {covid-19,imaging} |
+ salmon | 9 | {bio,covid-19} |
+ orthanc-dicomweb | 8 | {imaging,covid-19} |
plastimatch | 8 | {imaging} |
- king | 7 | {imaging,typesetting} |
+ king | 7 | {typesetting,imaging} |
libminc | 7 | {imaging-dev} |
ngs-sdk | 7 | {bio-dev} |
nifti2dicom | 7 | {imaging} |
@@ -41,7 +41,7 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
orthanc-gdcm | 6 | {imaging} |
orthanc-mysql | 6 | {imaging} |
orthanc-postgresql | 6 | {imaging} |
- oscar | 6 | {tools,data,practice} |
+ oscar | 6 | {data,practice,tools} |
sight | 6 | {imaging} |
treeview | 6 | {bio,bio-phylogeny} |
bart-view | 5 | {imaging} |
@@ -55,22 +55,22 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
libdivsufsort | 4 | {bio-dev} |
libncl | 4 | {bio} |
librdp-taxonomy-tree-java | 4 | {bio-dev} |
- melting | 4 | {bio,cloud} |
+ melting | 4 | {cloud,bio} |
phyutility | 4 | {cloud,bio} |
piler | 4 | {bio} |
rdp-classifier | 4 | {bio} |
runcircos-gui | 4 | {bio} |
saint | 4 | {bio} |
stacks | 4 | {bio} |
- anfo | 3 | {bio,cloud} |
+ anfo | 3 | {cloud,bio} |
beast-mcmc | 3 | {bio-phylogeny,bio} |
brig | 3 | {bio} |
cat-bat | 3 | {bio,covid-19} |
clonalorigin | 3 | {bio} |
elastix | 3 | {imaging} |
embassy-domainatrix | 3 | {cloud,bio} |
- embassy-domalign | 3 | {bio,cloud} |
- embassy-domsearch | 3 | {cloud,bio} |
+ embassy-domalign | 3 | {cloud,bio} |
+ embassy-domsearch | 3 | {bio,cloud} |
emboss-explorer | 3 | {bio} |
fastml | 3 | {bio} |
gatb-core | 3 | {bio} |
@@ -81,7 +81,7 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
libsbml | 3 | {bio-dev} |
mauve-aligner | 3 | {bio} |
metaphlan2 | 3 | {bio} |
- mhap | 3 | {bio,bio-ngs} |
+ mhap | 3 | {bio-ngs,bio} |
microbegps | 3 | {bio} |
ncbi-vdb | 3 | {bio-dev} |
opencfu | 3 | {laboratory} |
@@ -89,26 +89,26 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
orthanc-python | 3 | {covid-19} |
placnet | 3 | {bio} |
plasmidseeker | 3 | {bio} |
- proalign | 3 | {bio,bio-phylogeny} |
+ proalign | 3 | {bio-phylogeny,bio} |
pymia | 3 | {imaging-dev} |
rambo-k | 3 | {bio} |
rtax | 3 | {cloud,bio} |
sibsim4 | 3 | {cloud,bio} |
- spread-phy | 3 | {bio-phylogeny,bio} |
+ spread-phy | 3 | {bio,bio-phylogeny} |
arden | 2 | {cloud,bio} |
assemblytics | 2 | {bio} |
bambamc | 2 | {bio-dev} |
- bio-tradis | 2 | {bio-dev,bio} |
+ bio-tradis | 2 | {bio,bio-dev} |
bitseq | 2 | {bio} |
blimps | 2 | {bio} |
canu | 2 | {bio} |
clonalframeml | 2 | {bio,covid-19} |
delly | 2 | {covid-19,bio} |
- dextractor | 2 | {covid-19,bio} |
+ dextractor | 2 | {bio,covid-19} |
gatb-core | 2 | {bio-dev} |
gifticlib | 2 | {imaging-dev} |
hinge | 2 | {bio} |
- jmodeltest | 2 | {bio-phylogeny,bio} |
+ jmodeltest | 2 | {bio,bio-phylogeny} |
libbio-mage-utils-perl | 2 | {bio-dev} |
libbpp-core | 2 | {bio-dev} |
libbpp-phyl | 2 | {bio-dev} |
@@ -140,7 +140,7 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
suitename | 2 | {bio} |
tracetuner | 2 | {bio} |
varna | 2 | {bio} |
- zalign | 2 | {cloud,bio} |
+ zalign | 2 | {bio,cloud} |
atropos | 1 | {bio} |
biomaj3-cli | 1 | {cloud} |
bustools | 1 | {covid-19,bio} |
@@ -148,7 +148,7 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
cufflinks | 1 | {bio,cloud} |
emmax | 1 | {bio} |
htscodecs | 1 | {covid-19,bio-dev} |
- intake | 1 | {bio,bio-dev} |
+ intake | 1 | {bio-dev,bio} |
kmerresistance | 1 | {bio} |
libbigwig | 1 | {bio-dev} |
libchado-perl | 1 | {bio-dev} |
@@ -157,7 +157,7 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
pigx-rnaseq | 1 | {covid-19,bio} |
pique | 1 | {bio} |
plasmidid | 1 | {covid-19,bio} |
- pplacer | 1 | {bio-phylogeny,covid-19,bio} |
+ pplacer | 1 | {bio-phylogeny,bio,covid-19} |
pscan-chip | 1 | {bio} |
qcumber | 1 | {bio} |
shovill | 1 | {covid-19,bio} |
@@ -166,7 +166,7 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
soapsnp | 1 | {bio} |
spaln | 1 | {bio,covid-19} |
surankco | 1 | {bio} |
- thesias | 1 | {bio,covid-19} |
+ thesias | 1 | {covid-19,bio} |
tophat-recondition | 1 | {covid-19,bio} |
tvc | 1 | {bio} |
acedb | 0 | {cloud,bio} |
@@ -179,9 +179,9 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
libbiod | 0 | {bio-dev} |
libbioparser-dev | 0 | {bio-dev} |
libctapimkt | 0 | {practice} |
- libics | 0 | {covid-19,imaging-dev} |
+ libics | 0 | {imaging-dev,covid-19} |
libjloda-java | 0 | {bio-dev} |
- libmaus2 | 0 | {covid-19,bio-dev} |
+ libmaus2 | 0 | {bio-dev,covid-19} |
libmialm | 0 | {imaging-dev} |
libpsortb | 0 | {bio-dev} |
libxdf | 0 | {imaging-dev} |
@@ -189,21 +189,21 @@ Last-Update: Wed, 03 Nov 2021 13:42:04 +0000
metastudent-data-2 | 0 | {bio} |
mia | 0 | {imaging-dev} |
miaviewit | 0 | {imaging-dev} |
- milib | 0 | {bio-dev,covid-19} |
+ milib | 0 | {covid-19,bio-dev} |
nifticlib | 0 | {imaging-dev} |
opensurgsim | 0 | {imaging-dev} |
orthanc-imagej | 0 | {imaging} |
pbseqlib | 0 | {bio-dev} |
python-seqcluster | 0 | {bio} |
- python-seqcluster | 0 | {bio-dev,covid-19} |
+ python-seqcluster | 0 | {covid-19,bio-dev} |
python-wdlparse | 0 | {bio-dev} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
simpleitk | 0 | {imaging-dev} |
- smrtanalysis | 0 | {covid-19,bio} |
+ smrtanalysis | 0 | {bio,covid-19} |
trace2dbest | 0 | {bio} |
- varscan | 0 | {bio,covid-19} |
+ varscan | 0 | {covid-19,bio} |
vienna-rna | 0 | {bio,covid-19} |
xdffileio | 0 | {imaging-dev} |
mssstest | -1 | {tools} |
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/65ef10cf14685038d207d5ab98b04ce43bed6a3a
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/65ef10cf14685038d207d5ab98b04ce43bed6a3a
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20211104/f073e811/attachment-0001.htm>