[med-svn] [Git][med-team/plasmidid][master] 8 commits: Fix watchfile to detect new versions on github

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / plasmidid


Commits:
d4be41d5 by Andreas Tille at 2021-10-11T10:48:05+02:00
Fix watchfile to detect new versions on github

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a9618921 by Andreas Tille at 2021-10-11T10:49:05+02:00
routine-update: New upstream version

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47e4e49a by Andreas Tille at 2021-10-11T10:49:09+02:00
New upstream version 1.6.5+dfsg
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5e130370 by Andreas Tille at 2021-10-11T10:50:00+02:00
Update upstream source from tag 'upstream/1.6.5+dfsg'

Update to upstream version '1.6.5+dfsg'
with Debian dir ff590baf612c22e90c32dd27e14e372fd2ac6653
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866fe1dd by Andreas Tille at 2021-10-11T10:50:01+02:00
routine-update: Standards-Version: 4.6.0

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8391f92d by Andreas Tille at 2021-10-11T10:56:00+02:00
Adapt patches

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f4cb471c by Andreas Tille at 2021-10-11T10:57:03+02:00
Adapt tests to new path

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bbd7db62 by Andreas Tille at 2021-10-11T10:59:33+02:00
Upload to unstable

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28 changed files:

- CHANGELOG.md
- Dockerfile
- README.md
- − Singularity
- bin/blast_to_bed.sh
- bin/filter_fasta.sh
- bin/mash_screener.sh
- bin/prokka_annotation.sh
- bin/summary_report_pid.py
- config_files/OR.conf
- annotation_config_file.txt → config_files/annotation_config_file.txt
- config_files/circos_individual_1_3_3.conf
- config_files/circos_summary_1_3_3.conf
- config_files/simple.conf
- debian/changelog
- debian/control
- debian/patches/fixTests.patch
- debian/patches/spelling.patch
- debian/rules
- debian/watch
- + environment.yml
- − old/01_Trimmer_assembler_validater_BU_ISCIII.sh
- − old/05_Quast_report_BU_ISCIII.sh
- − old/1_filter_reads_to_plasmid_ddbb.sh
- − old/2_Find_plasmid_with_more_coverage.sh
- − old/3_Draw_plasmid_with_more_coverage.sh
- − old/4_Draw_circos_images.sh
- − old/5_Stats_coverage.sh


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/plasmidid/-/compare/1fb513b4f310d3b4e0e6d183d77105ca87e737fa...bbd7db62b48c7f3a028601b0e78455b57e3b7b7c

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View it on GitLab: https://salsa.debian.org/med-team/plasmidid/-/compare/1fb513b4f310d3b4e0e6d183d77105ca87e737fa...bbd7db62b48c7f3a028601b0e78455b57e3b7b7c
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