[med-svn] [Git][med-team/libsmithwaterman][master] 5 commits: routine-update: Packaging update
Andreas Tille (@tille)
gitlab at salsa.debian.org
Wed Oct 13 09:03:25 BST 2021
Andreas Tille pushed to branch master at Debian Med / libsmithwaterman
Commits:
47c76cf4 by Andreas Tille at 2021-10-13T09:54:46+02:00
routine-update: Packaging update
- - - - -
2b3c94dd by Andreas Tille at 2021-10-13T09:54:46+02:00
routine-update: Standards-Version: 4.6.0
- - - - -
f55e2f65 by Andreas Tille at 2021-10-13T09:54:53+02:00
Apply multi-arch hints.
+ libsmithwaterman-dev, libsmithwaterman0: Add Multi-Arch: same.
Changes-By: apply-multiarch-hints
- - - - -
70a489cb by Andreas Tille at 2021-10-13T10:01:16+02:00
Drop symbols file to reduce maintenance burden
- - - - -
53ce2801 by Andreas Tille at 2021-10-13T10:02:22+02:00
Upload to unstable
- - - - -
3 changed files:
- debian/changelog
- debian/control
- − debian/libsmithwaterman0.symbols
Changes:
=====================================
debian/changelog
=====================================
@@ -1,3 +1,14 @@
+libsmithwaterman (0.0+git20160702.2610e25-12) unstable; urgency=medium
+
+ * Packaging update
+ * Standards-Version: 4.6.0 (routine-update)
+ * Apply multi-arch hints.
+ + libsmithwaterman-dev, libsmithwaterman0: Add Multi-Arch: same.
+ * Drop symbols file to reduce maintenance burden
+ Closes: #984207
+
+ -- Andreas Tille <tille at debian.org> Wed, 13 Oct 2021 10:01:23 +0200
+
libsmithwaterman (0.0+git20160702.2610e25-11) unstable; urgency=medium
[ Christian Ehrhardt ]
=====================================
debian/control
=====================================
@@ -6,7 +6,7 @@ Priority: optional
Build-Depends: debhelper-compat (= 13),
d-shlibs,
libdisorder-dev
-Standards-Version: 4.5.1
+Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/libsmithwaterman
Vcs-Git: https://salsa.debian.org/med-team/libsmithwaterman.git
Homepage: https://github.com/ekg/smithwaterman
@@ -17,6 +17,7 @@ Architecture: any
Section: libs
Depends: ${shlibs:Depends},
${misc:Depends}
+Multi-Arch: same
Description: determine similar regions between two strings or genomic sequences (lib)
The Smith–Waterman algorithm performs local sequence alignment; that is,
for determining similar regions between two strings or nucleotide or
@@ -33,6 +34,7 @@ Depends: libsmithwaterman0 (= ${binary:Version}),
${shlibs:Depends},
${misc:Depends},
libdisorder-dev
+Multi-Arch: same
Description: determine similar regions between two strings or genomic sequences (devel)
The Smith–Waterman algorithm performs local sequence alignment; that is,
for determining similar regions between two strings or nucleotide or
=====================================
debian/libsmithwaterman0.symbols deleted
=====================================
@@ -1,77 +0,0 @@
-libsmithwaterman.so.0 libsmithwaterman0 #MINVER#
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- _Z12repeatCountslRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEi at Base 0.0+git20160702.2610e25
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- _Z15stablyLeftAlignNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERS4_S4_Riib at Base 0.0+git20160702.2610e25
- _Z9joinCIGARRKSt6vectorISt4pairIiNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEESaIS7_EE at Base 0.0+git20160702.2610e25
- _Z9leftAlignRNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES5_S5_Rib at Base 0.0+git20160702.2610e25
- _ZN11IndelAllele10readLengthEv at Base 0.0+git20160702.2610e25
- _ZN11IndelAllele11homopolymerEv at Base 0.0+git20160702.2610e25
- _ZN11IndelAllele15referenceLengthEv at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh13Directions_UPE at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh15Directions_LEFTE at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh15Directions_STOPE at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh15repeat_size_maxE at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh19CreateScoringMatrixEv at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh19Directions_DIAGONALE at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh23EnableEntropyGapPenaltyEf at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh23FLOAT_NEGATIVE_INFINITYE at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh26CorrectHomopolymerGapOrderEjj at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh27EnableHomoPolymerGapPenaltyEf at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh31EnableRepeatGapExtensionPenaltyEff at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotoh5AlignERjRNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKS6_S9_ at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotohC1Effff at Base 0.0+git20160702.2610e25
- _ZN19CSmithWatermanGotohC2Effff at Base 0.0+git20160702.2610e25
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- _ZN19CSmithWatermanGotohD2Ev at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman13Directions_UPE at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman14CalculateScoreERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES7_jjRfjj at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman15Directions_LEFTE at Base 0.0+git20160702.2610e25
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- _ZN20CBandedSmithWaterman17Position_REF_ZEROE at Base 0.0+git20160702.2610e25
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- _ZN20CBandedSmithWaterman19Position_QUERY_ZEROE at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman20ReinitializeMatricesERKhRKjS3_St4pairIS4_IjjES5_E at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman23FLOAT_NEGATIVE_INFINITYE at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman26CorrectHomopolymerGapOrderEjj at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman27EnableHomoPolymerGapPenaltyEf at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman27Position_REF_AND_QUERY_ZEROE at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman30Position_REF_AND_QUERO_NONZEROE at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman5AlignERjRNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKS6_S9_RSt4pairISA_IjjESB_E at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWaterman9TracebackERjRNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEERKS6_S9_jjjj at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWatermanC1Effffj at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWatermanC2Effffj at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWatermanD1Ev at Base 0.0+git20160702.2610e25
- _ZN20CBandedSmithWatermanD2Ev at Base 0.0+git20160702.2610e25
- (optional)_ZNKSt5ctypeIcE8do_widenEc at Base 0.0+git20160702.2610e25
- (arch=!ppc64el) _ZNSt12_Vector_baseIfSaIfEED1Ev at Base 0.0+git20160702.2610e25
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- (arch=!ppc64el) _ZNSt15_Rb_tree_headerC1EOS_ at Base 0.0+git20160702.2610e25
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- _ZNSt7__cxx1115basic_stringbufIcSt11char_traitsIcESaIcEED2Ev at Base 0.0+git20160702.2610e25
- (arch=!s390x !ppc64el optional)_ZNSt8_Rb_treeINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt4pairIKS5_iESt10_Select1stIS8_ESt4lessIS5_ESaIS8_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS8_ERS7_ at Base 0.0+git20160702.2610e25
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- _ZltRK11IndelAlleleS1_ at Base 0.0+git20160702.2610e25
- _ZneRK11IndelAlleleS1_ at Base 0.0+git20160702.2610e25
View it on GitLab: https://salsa.debian.org/med-team/libsmithwaterman/-/compare/cdaff5ab12195d1cb0c21d212758a5e207c23ba0...53ce280150a5ebf7f43ec8e3bfcbec39915a9935
--
View it on GitLab: https://salsa.debian.org/med-team/libsmithwaterman/-/compare/cdaff5ab12195d1cb0c21d212758a5e207c23ba0...53ce280150a5ebf7f43ec8e3bfcbec39915a9935
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