[med-svn] [Git][med-team/salmon][master] 6 commits: routine-update: Fix watchfile to detect new versions on github

[Steffen Möller (@moeller)]

Steffen Möller pushed to branch master at Debian Med / salmon


Commits:
17886052 by Steffen Moeller at 2021-09-03T15:34:51+02:00
routine-update: Fix watchfile to detect new versions on github

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75af986f by Steffen Moeller at 2021-09-03T15:35:00+02:00
routine-update: New upstream version

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603e891c by Steffen Moeller at 2021-09-03T15:35:03+02:00
New upstream version 1.5.2+ds1
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e7747265 by Steffen Moeller at 2021-09-03T15:35:10+02:00
Update upstream source from tag 'upstream/1.5.2+ds1'

Update to upstream version '1.5.2+ds1'
with Debian dir ecbeac5e0483331d52902cb5925f623445d604ee
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fcdc75cd by Steffen Moeller at 2021-09-03T15:35:12+02:00
routine-update: Standards-Version: 4.6.0

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d009c20a by Steffen Moeller at 2021-09-03T15:58:28+02:00
Missing Sphinx furo theme to overcome build error

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30 changed files:

- README.md
- current_version.txt
- debian/changelog
- debian/control
- debian/copyright
- debian/upstream/metadata
- debian/watch
- + doc/logo.png
- + doc/requirements.txt
- doc/source/alevin.rst
- doc/source/conf.py
- doc/source/file_formats.rst
- doc/source/salmon.rst
- docker/Dockerfile
- docker/build_test.sh
- + include/AlignmentCommon.hpp
- include/AlignmentGroup.hpp
- include/AlignmentLibrary.hpp
- include/AlignmentModel.hpp
- include/FastxParserThreadUtils.hpp
- include/GZipWriter.hpp
- + include/ONTAlignmentModel.hpp
- include/ReadPair.hpp
- include/SalmonConfig.hpp
- include/SalmonOpts.hpp
- include/Sampler.hpp
- include/SingleCellProtocols.hpp
- include/Transcript.hpp
- include/UnpairedRead.hpp
- + include/backtrace.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/salmon/-/compare/83ee7dfe75e9583d613312739255ba8c2dbccb6d...d009c20a5b2d33d680ba03c60c4262228311b5e1

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View it on GitLab: https://salsa.debian.org/med-team/salmon/-/compare/83ee7dfe75e9583d613312739255ba8c2dbccb6d...d009c20a5b2d33d680ba03c60c4262228311b5e1
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