[med-svn] [Git][med-team/salmon][upstream] New upstream version 1.5.2+ds1

[Steffen Möller (@moeller)]

Steffen Möller pushed to branch upstream at Debian Med / salmon


Commits:
603e891c by Steffen Moeller at 2021-09-03T15:35:03+02:00
New upstream version 1.5.2+ds1
- - - - -


30 changed files:

- README.md
- current_version.txt
- + doc/logo.png
- + doc/requirements.txt
- doc/source/alevin.rst
- doc/source/conf.py
- doc/source/file_formats.rst
- doc/source/salmon.rst
- docker/Dockerfile
- docker/build_test.sh
- + include/AlignmentCommon.hpp
- include/AlignmentGroup.hpp
- include/AlignmentLibrary.hpp
- include/AlignmentModel.hpp
- include/FastxParserThreadUtils.hpp
- include/GZipWriter.hpp
- + include/ONTAlignmentModel.hpp
- include/ReadPair.hpp
- include/SalmonConfig.hpp
- include/SalmonOpts.hpp
- include/Sampler.hpp
- include/SingleCellProtocols.hpp
- include/Transcript.hpp
- include/UnpairedRead.hpp
- + include/backtrace.hpp
- include/concurrentqueue.h
- include/cuckoohash_map.hh
- + include/dbg.hpp
- scripts/fetchPufferfish.sh
- src/Alevin.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/salmon/-/commit/603e891c1d42dc5786ac80417178abab357b7c92

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View it on GitLab: https://salsa.debian.org/med-team/salmon/-/commit/603e891c1d42dc5786ac80417178abab357b7c92
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