[med-svn] [Git][med-team/toil][upstream] New upstream version 5.7.1

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / toil


Commits:
8d5c635d by Andreas Tille at 2022-12-06T15:57:54+01:00
New upstream version 5.7.1
- - - - -


30 changed files:

- .gitlab-ci.yml
- Makefile
- attic/README.md
- contrib/admin/cleanup_aws_resources.py
- contrib/admin/mypy-with-ignore.py
- + contrib/hooks/lib.py
- + contrib/hooks/mypy-after-commit.py
- + contrib/hooks/mypy-before-push.py
- + contrib/pod-murder-bot/murder.yaml
- + contrib/pod-murder-bot/podKiller.sh
- contrib/typeshed/dill/_dill.pyi
- dashboard/grafana/toil_dashboard.json
- dashboard/mtail/Dockerfile
- docker/Dockerfile.py
- + docker/singularity-sources.tsv
- docs/appendices/environment_vars.rst
- docs/contributing/contributing.rst
- docs/developingWorkflows/toilAPIBatchsystem.rst
- docs/running/cliOptions.rst
- docs/running/cloud/clusterUtils.rst
- − docs/running/server/Dockerfile
- docs/running/server/docker-compose.yml
- docs/running/server/wes.rst
- requirements-aws.txt
- requirements-cwl.txt
- requirements-dev.txt
- requirements-google.txt
- requirements-server.txt
- setup.cfg
- setup.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/toil/-/commit/8d5c635defdad60db05b60e83f88bac79f3e89a7

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