[med-svn] [Git][med-team/pbcopper][master] 6 commits: New upstream version 2.0.0+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / pbcopper


Commits:
ffdb345d by Andreas Tille at 2022-02-17T19:36:19+01:00
New upstream version 2.0.0+dfsg
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e338e3cb by Andreas Tille at 2022-02-17T19:36:19+01:00
routine-update: New upstream version

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8f06a71e by Andreas Tille at 2022-02-17T19:36:22+01:00
Update upstream source from tag 'upstream/2.0.0+dfsg'

Update to upstream version '2.0.0+dfsg'
with Debian dir c850722b90558ebbc425bc001bdd3efbda90d44b
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f17285ea by Andreas Tille at 2022-02-17T19:40:37+01:00
Update patches

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2b334f45 by Andreas Tille at 2022-02-17T20:06:18+01:00
Follow upstream soname bump

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6ac8309c by Andreas Tille at 2022-02-17T20:09:45+01:00
Upload to unstable

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30 changed files:

- .gitignore
- CHANGELOG.md
- debian/changelog
- debian/control
- − debian/patches/boost_optional.patch
- debian/patches/series
- debian/patches/static+shared_lib.patch
- include/meson.build
- + include/pbcopper/algorithm/Heteroduplex.h
- + include/pbcopper/algorithm/internal/HeteroduplexUtils.h
- include/pbcopper/align/AffineAlignment.h
- include/pbcopper/align/AlignConfig.h
- include/pbcopper/align/BandedChainAlignment.h
- include/pbcopper/align/ChainSeeds.h
- include/pbcopper/align/ChainSeedsConfig.h
- include/pbcopper/align/EdlibAlign.h
- include/pbcopper/align/FindSeeds.h
- + include/pbcopper/align/GlobalLocalAlignment.h
- include/pbcopper/align/LinearAlignment.h
- include/pbcopper/align/LocalAlignment.h
- include/pbcopper/align/PairwiseAlignment.h
- include/pbcopper/align/Seed.h
- include/pbcopper/align/Seeds.h
- include/pbcopper/align/SparseAlignment.h
- include/pbcopper/align/internal/BCAlignBlocks.h
- include/pbcopper/align/internal/BCAlignImpl.h
- include/pbcopper/cli2/CLI.h
- include/pbcopper/cli2/Interface.h
- include/pbcopper/cli2/MultiToolInterface.h
- include/pbcopper/cli2/Option.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/pbcopper/-/compare/f4fb53a552571757be0cfea9b9fa3e0781831da4...6ac8309c76dd0af1d66f57673d6ca722fd0a4f4a

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View it on GitLab: https://salsa.debian.org/med-team/pbcopper/-/compare/f4fb53a552571757be0cfea9b9fa3e0781831da4...6ac8309c76dd0af1d66f57673d6ca722fd0a4f4a
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