Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
399968cf by Andreas Tille at 2022-01-04T13:42:26+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,23 +1,23 @@
-Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
+Last-Update: Tue, 04 Jan 2022 13:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 172 | {imaging,covid-19} |
- orthanc | 104 | {covid-19,imaging,practice} |
- orthanc-wsi | 53 | {oncology,laboratory,practice,his,covid-19,imaging} |
- htsjdk | 31 | {bio-dev} |
+ dcmtk | 176 | {imaging,covid-19} |
+ orthanc | 107 | {covid-19,imaging,practice} |
+ orthanc-wsi | 54 | {oncology,laboratory,practice,his,covid-19,imaging} |
+ htsjdk | 30 | {bio-dev} |
dicom3tools | 26 | {imaging} |
- amide | 24 | {imaging} |
- dcm2niix | 22 | {imaging} |
+ amide | 23 | {imaging} |
dicomscope | 22 | {imaging} |
+ dcm2niix | 21 | {imaging} |
orthanc-webviewer | 17 | {imaging} |
gdcm | 15 | {covid-19,imaging} |
gnumed-server | 15 | {covid-19,practice} |
- ngs-sdk | 15 | {bio-dev} |
minc-tools | 14 | {imaging} |
+ ngs-sdk | 14 | {bio-dev} |
adun.app | 13 | {bio} |
- insighttoolkit4 | 13 | {imaging-dev} |
pixelmed | 13 | {imaging} |
+ insighttoolkit4 | 12 | {imaging-dev} |
openslide | 12 | {imaging} |
dicomnifti | 11 | {imaging} |
invesalius | 11 | {imaging} |
@@ -25,11 +25,11 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
libminc | 9 | {imaging-dev} |
nifticlib | 9 | {imaging} |
jebl2 | 8 | {bio-dev} |
- king | 8 | {typesetting,imaging} |
mia | 8 | {imaging} |
nifticlib | 8 | {imaging-dev} |
plastimatch | 8 | {imaging} |
biojava-live | 7 | {bio-dev} |
+ king | 7 | {typesetting,imaging} |
mrtrix3 | 7 | {imaging} |
ngs-sdk | 7 | {bio-dev} |
lagan | 6 | {bio} |
@@ -42,19 +42,21 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
salmon | 6 | {covid-19,bio} |
beast-mcmc | 5 | {bio-phylogeny,bio} |
libdivsufsort | 5 | {bio-dev} |
+ obitools | 5 | {bio} |
bio-tradis | 4 | {bio-dev,bio} |
bitseq | 4 | {bio} |
brig | 4 | {bio} |
embassy-domainatrix | 4 | {bio,cloud} |
embassy-domalign | 4 | {cloud,bio} |
nifti2dicom | 4 | {imaging} |
- obitools | 4 | {bio} |
oscar | 4 | {data,tools,practice} |
tracetuner | 4 | {bio} |
anfo | 3 | {bio,cloud} |
arden | 3 | {cloud,bio} |
assemblytics | 3 | {bio} |
+ atropos | 3 | {bio} |
bart-view | 3 | {imaging} |
+ biomaj3-cli | 3 | {cloud} |
canu | 3 | {bio} |
cat-bat | 3 | {bio,covid-19} |
clonalorigin | 3 | {bio} |
@@ -81,8 +83,6 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
treeview | 3 | {bio,bio-phylogeny} |
tvc | 3 | {bio} |
zalign | 3 | {bio,cloud} |
- atropos | 2 | {bio} |
- biomaj3-cli | 2 | {cloud} |
blimps | 2 | {bio} |
clonalframeml | 2 | {covid-19,bio} |
delly | 2 | {bio,covid-19} |
@@ -96,12 +96,14 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
lamarc | 2 | {bio} |
libpal-java | 2 | {bio-dev} |
mauve-aligner | 2 | {bio} |
+ microbegps | 2 | {bio} |
orthanc-gdcm | 2 | {imaging} |
orthanc-mysql | 2 | {imaging} |
papyrus | 2 | {imaging-dev} |
phyutility | 2 | {bio,cloud} |
pique | 2 | {bio} |
placnet | 2 | {bio} |
+ plasmidid | 2 | {covid-19,bio} |
plasmidseeker | 2 | {bio} |
pplacer | 2 | {covid-19,bio,bio-phylogeny} |
proalign | 2 | {bio-phylogeny,bio} |
@@ -130,12 +132,11 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
emboss-explorer | 1 | {bio} |
getdata | 1 | {bio} |
libbio-mage-utils-perl | 1 | {bio-dev} |
+ libchado-perl | 1 | {bio-dev} |
libctapimkt | 1 | {practice} |
libsbml | 1 | {bio-dev} |
libvistaio | 1 | {imaging-dev} |
metaphlan2 | 1 | {bio} |
- microbegps | 1 | {bio} |
- plasmidid | 1 | {covid-19,bio} |
python-wdlparse | 1 | {bio-dev} |
shovill | 1 | {covid-19,bio} |
varscan | 1 | {bio,covid-19} |
@@ -162,7 +163,6 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
libbpp-raa | 0 | {bio-dev} |
libbpp-seq | 0 | {bio-dev} |
libbpp-seq-omics | 0 | {bio-dev} |
- libchado-perl | 0 | {bio-dev} |
libgenome | 0 | {bio-dev} |
libgkarrays | 0 | {bio-dev} |
libhmsbeagle | 0 | {bio-dev} |
@@ -196,6 +196,7 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
seq-gen | 0 | {bio} |
+ sight | 0 | {imaging-dev} |
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
srf | 0 | {bio-dev} |
@@ -203,7 +204,6 @@ Last-Update: Tue, 04 Jan 2022 01:42:03 +0000
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
mssstest | -1 | {tools} |
- sight | -1 | {imaging-dev} |
tipp | -1 | {bio,covid-19} |
(233 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/399968cf3c75590dd5abb5995ccb3f0032a71e7c
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/399968cf3c75590dd5abb5995ccb3f0032a71e7c
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