Étienne Mollier pushed to branch master at Debian Med / python-bcbio-gff
Commits:
b7d49457 by Étienne Mollier at 2022-01-16T16:29:21+01:00
routine-update: New upstream version
- - - - -
912c8c85 by Étienne Mollier at 2022-01-16T16:29:22+01:00
New upstream version 0.6.9
- - - - -
e5e1667e by Étienne Mollier at 2022-01-16T16:29:23+01:00
Update upstream source from tag 'upstream/0.6.9'
Update to upstream version '0.6.9'
with Debian dir 565ae288046306e7dd08c6ef41110dc589787a44
- - - - -
585a08ab by Étienne Mollier at 2022-01-16T16:29:33+01:00
Add missing build dependency on dh addon.
Changes-By: lintian-brush
Fixes: lintian: missing-build-dependency-for-dh_-command
See-also: https://lintian.debian.org/tags/missing-build-dependency-for-dh_-command.html
- - - - -
14fdd7f1 by Étienne Mollier at 2022-01-16T16:34:49+01:00
routine-update: Ready to upload to unstable
- - - - -
6 changed files:
- BCBio/GFF/GFFParser.py
- BCBio/GFF/__init__.py
- PKG-INFO
- bcbio_gff.egg-info/PKG-INFO
- debian/changelog
- debian/control
Changes:
=====================================
BCBio/GFF/GFFParser.py
=====================================
@@ -406,7 +406,7 @@ class _AbstractMapReduceGFF:
if find_id in base:
return find_id
# NCBI style IDs in find_id
- elif find_id.find("|") > 0:
+ elif find_id and find_id.find("|") > 0:
for test_id in [x.strip() for x in find_id.split("|")[1:]]:
if test_id and test_id in base:
return test_id
=====================================
BCBio/GFF/__init__.py
=====================================
@@ -3,4 +3,4 @@
from BCBio.GFF.GFFParser import GFFParser, DiscoGFFParser, GFFExaminer, parse, parse_simple
from BCBio.GFF.GFFOutput import GFF3Writer, write
-__version__ = "0.6.8"
+__version__ = "0.6.9"
=====================================
PKG-INFO
=====================================
@@ -1,6 +1,6 @@
Metadata-Version: 1.0
Name: bcbio-gff
-Version: 0.6.8
+Version: 0.6.9
Summary: Read and write Generic Feature Format (GFF) with Biopython integration.
Home-page: https://github.com/chapmanb/bcbb/tree/master/gff
Author: Brad Chapman
=====================================
bcbio_gff.egg-info/PKG-INFO
=====================================
@@ -1,6 +1,6 @@
Metadata-Version: 1.0
Name: bcbio-gff
-Version: 0.6.8
+Version: 0.6.9
Summary: Read and write Generic Feature Format (GFF) with Biopython integration.
Home-page: https://github.com/chapmanb/bcbb/tree/master/gff
Author: Brad Chapman
=====================================
debian/changelog
=====================================
@@ -1,3 +1,9 @@
+python-bcbio-gff (0.6.9-1) unstable; urgency=medium
+
+ * New upstream version
+
+ -- Étienne Mollier <emollier at debian.org> Sun, 16 Jan 2022 16:29:42 +0100
+
python-bcbio-gff (0.6.8-1) unstable; urgency=medium
* Team Upload.
=====================================
debian/control
=====================================
@@ -10,7 +10,8 @@ Build-Depends: debhelper-compat (= 13),
python3-all,
python3-setuptools,
python3-biopython,
- python3-six
+ python3-six,
+ debhelper
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/python-bcbio-gff
Vcs-Git: https://salsa.debian.org/med-team/python-bcbio-gff.git
View it on GitLab: https://salsa.debian.org/med-team/python-bcbio-gff/-/compare/a0c8f7c5b3bfaa3b3a269bb546b80e7ac84166a8...14fdd7f1a39b9436767abcb22583bc80412cf3f5
--
View it on GitLab: https://salsa.debian.org/med-team/python-bcbio-gff/-/compare/a0c8f7c5b3bfaa3b3a269bb546b80e7ac84166a8...14fdd7f1a39b9436767abcb22583bc80412cf3f5
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