[med-svn] [Git][med-team/tiddit][upstream] New upstream version 3.1.0+dfsg

[Andreas Tille (@tille)]

Andreas Tille pushed to branch upstream at Debian Med / tiddit


Commits:
15d04a76 by Andreas Tille at 2022-07-26T09:44:27+02:00
New upstream version 3.1.0+dfsg
- - - - -


30 changed files:

- README.md
- − TIDDIT.py
- + setup.py
- − src/TIDDIT.cpp
- − src/TIDDIT_calling.py
- − src/TIDDIT_coverage.py
- − src/TIDDIT_filtering.py
- − src/TIDDIT_signals.py
- − src/common.h
- − src/data_structures/CoverageModule.cpp
- − src/data_structures/ProgramModules.h
- − src/data_structures/Translocation.cpp
- − src/data_structures/Translocation.h
- − src/data_structures/findTranslocationsOnTheFly.cpp
- − src/errors/Data_Exception.cpp
- − src/errors/Data_Exception.h
- − src/errors/Data_Not_Found.cpp
- − src/errors/Data_Not_Found.h
- − src/errors/File_Not_Found.cpp
- − src/errors/File_Not_Found.h
- − src/errors/Generic_Exception.cpp
- − src/errors/Generic_Exception.h
- − src/errors/Incorrect_Format.cpp
- − src/errors/Incorrect_Format.h
- − src/setup.py
- src/DBSCAN.py → tiddit/DBSCAN.py
- + tiddit/__init__.py
- + tiddit/__main__.py
- + tiddit/tiddit_cluster.pyx
- + tiddit/tiddit_contig_analysis.pyx


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/tiddit/-/commit/15d04a76010615687bf49bf351e866b070520ea5

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View it on GitLab: https://salsa.debian.org/med-team/tiddit/-/commit/15d04a76010615687bf49bf351e866b070520ea5
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