[med-svn] [Git][med-team/busco][upstream] New upstream version 5.4.2

[Nilesh Patra (@nilesh)]

Nilesh Patra pushed to branch upstream at Debian Med / busco


Commits:
8f0dc45a by Nilesh Patra at 2022-07-29T18:22:45+05:30
New upstream version 5.4.2
- - - - -


27 changed files:

- CHANGELOG
- config/config.ini
- src/busco/Actions.py
- src/busco/AutoLineage.py
- src/busco/BuscoConfig.py
- src/busco/BuscoDownloadManager.py
- src/busco/BuscoLogger.py
- src/busco/BuscoPlacer.py
- src/busco/BuscoRunner.py
- src/busco/ConfigManager.py
- src/busco/_version.py
- src/busco/analysis/Analysis.py
- src/busco/analysis/BuscoAnalysis.py
- src/busco/analysis/GeneSetAnalysis.py
- src/busco/analysis/GenomeAnalysis.py
- src/busco/analysis/TranscriptomeAnalysis.py
- src/busco/busco_tools/Toolset.py
- src/busco/busco_tools/augustus.py
- src/busco/busco_tools/base.py
- + src/busco/busco_tools/bbtools.py
- src/busco/busco_tools/blast.py
- src/busco/busco_tools/hmmer.py
- src/busco/busco_tools/metaeuk.py
- src/busco/busco_tools/prodigal.py
- src/busco/busco_tools/sepp.py
- src/busco/run_BUSCO.py
- test_data/bacteria/expected_log.txt


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/busco/-/commit/8f0dc45a13dabe683dbc41e7f6c51bc02bf16d86

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