Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
9cd63a2c by Andreas Tille at 2022-06-11T13:42:44+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,32 +1,32 @@
-Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
+Last-Update: Sat, 11 Jun 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 167 | {covid-19,imaging} |
+ dcmtk | 169 | {covid-19,imaging} |
orthanc | 96 | {imaging,covid-19,practice} |
orthanc-wsi | 49 | {covid-19,imaging,his,laboratory,oncology,practice} |
- node-shiny-server | 40 | {covid-19,epi} |
- amide | 25 | {imaging} |
- nipype | 25 | {imaging-dev,imaging} |
- dicom3tools | 21 | {imaging} |
+ node-shiny-server | 42 | {covid-19,epi} |
+ amide | 24 | {imaging} |
dicomscope | 21 | {imaging} |
+ dicom3tools | 20 | {imaging} |
orthanc-webviewer | 17 | {imaging} |
gnumed-server | 14 | {practice,covid-19} |
+ gdcm | 12 | {imaging-dev} |
invesalius | 12 | {imaging} |
orthanc-dicomweb | 12 | {covid-19,imaging} |
- gdcm | 11 | {imaging-dev} |
biojava-live | 10 | {bio-dev} |
gdcm | 10 | {imaging,covid-19} |
- adun.app | 8 | {bio} |
+ nipype | 10 | {imaging-dev,imaging} |
pixelmed | 8 | {imaging} |
+ adun.app | 7 | {bio} |
librg-utils-perl | 7 | {bio} |
mrtrix3 | 7 | {imaging} |
orthanc-postgresql | 7 | {imaging} |
- bio-tradis | 6 | {bio,bio-dev} |
jebl2 | 6 | {bio-dev} |
libminc | 6 | {imaging-dev} |
nifti2dicom | 6 | {imaging} |
treeview | 6 | {bio,bio-phylogeny} |
+ bio-tradis | 5 | {bio,bio-dev} |
canu | 5 | {bio} |
elastix | 5 | {imaging} |
obitools | 5 | {bio} |
@@ -41,7 +41,6 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
ghmm | 4 | {bio} |
king | 4 | {typesetting,imaging} |
lamarc | 4 | {bio} |
- libbio-mage-utils-perl | 4 | {bio-dev} |
libncl | 4 | {bio} |
libsbml | 4 | {bio-dev} |
mia | 4 | {imaging} |
@@ -73,7 +72,7 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
hinge | 3 | {bio} |
ipig | 3 | {bio} |
jmodeltest | 3 | {bio-phylogeny,bio} |
- libchado-perl | 3 | {bio-dev} |
+ libbio-mage-utils-perl | 3 | {bio-dev} |
libdivsufsort | 3 | {bio-dev} |
libpal-java | 3 | {bio-dev} |
librdp-taxonomy-tree-java | 3 | {bio-dev} |
@@ -100,10 +99,10 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
dextractor | 2 | {covid-19,bio} |
embassy-domalign | 2 | {bio,cloud} |
embassy-domsearch | 2 | {bio,cloud} |
- emboss-explorer | 2 | {bio} |
emmax | 2 | {bio} |
htscodecs | 2 | {bio-dev,covid-19} |
kmerresistance | 2 | {bio} |
+ libchado-perl | 2 | {bio-dev} |
libgenome | 2 | {bio-dev} |
metaphlan2 | 2 | {bio} |
orthanc-python | 2 | {covid-19} |
@@ -121,6 +120,7 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
ctn | 1 | {imaging-dev} |
cufflinks | 1 | {cloud,bio} |
cutesv | 1 | {bio} |
+ emboss-explorer | 1 | {bio} |
emperor | 1 | {bio} |
gatb-core | 1 | {bio-dev} |
insighttoolkit5 | 1 | {imaging-dev} |
@@ -146,11 +146,11 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
pique | 1 | {bio} |
plasmidid | 1 | {bio,covid-19} |
pplacer | 1 | {covid-19,bio,bio-phylogeny} |
- python-seqcluster | 1 | {bio-dev,covid-19} |
seq-gen | 1 | {bio} |
srf | 1 | {bio-dev} |
tipp | 1 | {covid-19,bio} |
varscan | 1 | {bio,covid-19} |
+ vienna-rna | 1 | {bio,covid-19} |
biojava4-live | 0 | {bio-dev} |
biosyntax | 0 | {bio} |
camp | 0 | {imaging-dev} |
@@ -177,12 +177,12 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
pbcopper | 0 | {bio-dev} |
pbseqlib | 0 | {bio-dev} |
provean | 0 | {bio} |
+ python-seqcluster | 0 | {bio-dev,covid-19} |
python-seqcluster | 0 | {bio} |
resfinder-db | 0 | {bio} |
sbmltoolbox | 0 | {bio-dev} |
simpleitk | 0 | {imaging-dev} |
smrtanalysis | 0 | {bio,covid-19} |
- vienna-rna | 0 | {bio,covid-19} |
xdffileio | 0 | {imaging-dev} |
xxsds-dynamic | 0 | {bio-dev} |
libmaus2 | -1 | {bio-dev,covid-19} |
=====================================
debian-science-tests.txt
=====================================
@@ -1,104 +1,100 @@
-Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
+Last-Update: Sat, 11 Jun 2022 13:42:04 +0000
Source | Vote | Tasks | Tags
-----------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2934 | {viewing} |
- sympy | 1848 | {physics,nanoscale-physics} |
- armadillo | 198 | {mathematics-dev} |
- suitesparse | 145 | {mathematics-dev,numericalcomputation} |
- python-pyqtgraph | 130 | {viewing} |
- atlas | 91 | {mathematics-dev} |
- nltk | 82 | {linguistics} |
- arpack | 73 | {mathematics-dev} |
- cypari2 | 52 | {mathematics-dev} |
- pyzo | 49 | {numericalcomputation} |
- imview | 44 | {viewing} |
- arduino-mk | 42 | {robotics} |
- rubiks | 37 | {geometry,mathematics} |
- eclib | 36 | {mathematics} |
- fftw | 36 | {mathematics-dev,meteorology-dev,physics-dev} |
+ gts | 2930 | {viewing} |
+ sympy | 1844 | {nanoscale-physics,physics} |
+ armadillo | 194 | {mathematics-dev} |
+ suitesparse | 144 | {mathematics-dev,numericalcomputation} |
+ python-pyqtgraph | 133 | {viewing} |
+ atlas | 89 | {mathematics-dev} |
+ nltk | 80 | {linguistics} |
+ arpack | 69 | {mathematics-dev} |
+ cypari2 | 50 | {mathematics-dev} |
+ pyzo | 50 | {numericalcomputation} |
+ imview | 46 | {viewing} |
+ arduino-mk | 40 | {robotics} |
+ fftw | 36 | {physics-dev,mathematics-dev,meteorology-dev} |
+ rubiks | 36 | {geometry,mathematics} |
+ eclib | 35 | {mathematics} |
flintqs | 35 | {mathematics} |
- sketch | 28 | {typesetting} |
+ sketch | 27 | {typesetting} |
feedgnuplot | 23 | {viewing} |
cernlib | 22 | {highenergy-physics} |
- bossa | 21 | {devices} |
- flann | 20 | {mathematics-dev,engineering-dev} |
- geg | 19 | {viewing} |
- libmatio | 18 | {mathematics-dev} |
+ bossa | 20 | {devices} |
+ flann | 19 | {mathematics-dev,engineering-dev} |
+ fftw | 18 | {meteorology-dev,mathematics-dev,physics-dev} |
+ geg | 18 | {viewing} |
+ neuron | 18 | {simulations,highenergy-physics,neuroscience-modeling} |
vitables | 18 | {numericalcomputation} |
- fftw | 17 | {mathematics-dev,meteorology-dev,physics-dev} |
- neuron | 17 | {neuroscience-modeling,highenergy-physics,simulations} |
cernlib | 16 | {highenergy-physics-dev} |
gts | 16 | {viewing-dev} |
- ntl | 15 | {mathematics-dev} |
- scalapack | 15 | {nanoscale-physics-dev} |
- auto-07p | 14 | {mathematics} |
+ libmatio | 16 | {mathematics-dev} |
+ ppl | 15 | {numericalcomputation} |
guidata | 14 | {dataacquisition-dev} |
+ ntl | 14 | {mathematics-dev} |
opencascade | 14 | {simulations} |
picosat | 14 | {logic} |
- ppl | 14 | {numericalcomputation} |
- coinor-symphony | 13 | {mathematics,logic,numericalcomputation} |
+ auto-07p | 13 | {mathematics} |
+ coinor-symphony | 13 | {logic,numericalcomputation,mathematics} |
form | 13 | {mathematics} |
- getdp | 13 | {engineering,simulations,mathematics} |
- gfsview | 13 | {viewing} |
mathgl | 13 | {viewing} |
- polylib | 13 | {mathematics} |
- apophenia | 12 | {statistics} |
- guiqwt | 12 | {numericalcomputation,viewing} |
- ipe-tools | 12 | {typesetting} |
+ scalapack | 13 | {nanoscale-physics-dev} |
+ getdp | 12 | {engineering,simulations,mathematics} |
+ gfsview | 12 | {viewing} |
+ guiqwt | 12 | {viewing,numericalcomputation} |
libm4ri | 12 | {mathematics-dev} |
- rheolef | 12 | {mathematics} |
- debian-science | 11 | {nanoscale-physics,mathematics,physics,economics,machine-learning} |
+ neuron | 12 | {highenergy-physics-dev} |
+ polylib | 12 | {mathematics} |
+ apophenia | 11 | {statistics} |
dune-uggrid | 11 | {mathematics-dev} |
- matlab-support | 11 | {mathematics,numericalcomputation} |
- neuron | 11 | {highenergy-physics-dev} |
+ ipe-tools | 11 | {typesetting} |
opticalraytracer | 11 | {physics} |
- ros-ros-environment | 11 | {robotics-dev} |
cliquer | 10 | {mathematics} |
- debian-science | 10 | {physics,nanoscale-physics,economics,statistics} |
- jeuclid | 10 | {viewing,typesetting} |
+ debian-science | 10 | {mathematics,economics,machine-learning,physics,nanoscale-physics} |
pcl | 10 | {robotics-dev} |
+ rheolef | 10 | {mathematics} |
+ ros-ros-environment | 10 | {robotics-dev} |
syrthes | 10 | {engineering} |
alberta | 9 | {engineering-dev} |
- debian-science | 9 | {machine-learning,neuroscience-cognitive} |
+ debian-science | 9 | {economics,statistics,nanoscale-physics,physics} |
+ debian-science | 9 | {neuroscience-cognitive,machine-learning} |
+ jeuclid | 9 | {typesetting,viewing} |
libcgns | 9 | {engineering} |
- lrcalc | 9 | {mathematics} |
- lxi-tools | 9 | {engineering,dataacquisition} |
- python-escript | 9 | {numericalcomputation,engineering,simulations} |
+ lxi-tools | 9 | {dataacquisition,engineering} |
scram | 9 | {engineering} |
tango | 9 | {dataacquisition} |
- toulbar2 | 9 | {mathematics,numericalcomputation,logic,physics} |
uctodata | 9 | {linguistics} |
libm4rie | 8 | {mathematics-dev} |
+ lrcalc | 8 | {mathematics} |
opencascade | 8 | {simulations} |
+ python-escript | 8 | {numericalcomputation,simulations,engineering} |
ros-rosconsole | 8 | {robotics-dev} |
+ toulbar2 | 8 | {logic,numericalcomputation,mathematics,physics} |
ucto | 8 | {linguistics} |
cliquer | 7 | {mathematics-dev} |
- debian-science | 7 | {nanoscale-physics,economics,physics,machine-learning} |
iml | 7 | {mathematics-dev} |
libmatheval | 7 | {mathematics} |
libzn-poly | 7 | {mathematics-dev} |
- urdfdom-headers | 7 | {robotics-dev} |
+ matlab-support | 7 | {numericalcomputation,mathematics} |
code-saturne | 6 | {mathematics-dev,engineering-dev} |
+ debian-science | 6 | {economics,physics,nanoscale-physics,machine-learning} |
dune-istl | 6 | {mathematics-dev} |
dxflib | 6 | {engineering-dev} |
dxsamples | 6 | {nanoscale-physics} |
eclib | 6 | {mathematics-dev} |
- ipe-tools | 6 | {typesetting} |
libhomfly | 6 | {mathematics-dev} |
- libitpp | 6 | {mathematics-dev,engineering-dev} |
+ libitpp | 6 | {engineering-dev,mathematics-dev} |
libvigraimpex | 6 | {imageanalysis-dev,machine-learning} |
+ urdfdom-headers | 6 | {robotics-dev} |
cimg | 5 | {imageanalysis-dev} | {x11::library}
- coinmp | 5 | {numericalcomputation,logic,mathematics-dev} |
+ coinmp | 5 | {mathematics-dev,logic,numericalcomputation} |
frog | 5 | {linguistics} |
gf2x | 5 | {mathematics-dev} |
- harp | 5 | {meteorology} |
+ ipe-tools | 5 | {typesetting} |
irstlm | 5 | {linguistics} |
- libmatheval | 5 | {mathematics-dev} |
lrcalc | 5 | {mathematics-dev} |
muparser | 5 | {mathematics-dev} |
- neuron | 5 | {highenergy-physics-dev} |
- psurface | 5 | {numericalcomputation} |
qd | 5 | {mathematics-dev} |
sac2mseed | 5 | {geography} |
tango | 5 | {dataacquisition} |
@@ -106,13 +102,16 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
apertium-streamparser | 4 | {linguistics} |
astk | 4 | {engineering} |
cbflib | 4 | {nanoscale-physics} |
- debian-science | 4 | {electrophysiology} |
debian-science | 4 | {tools} |
+ debian-science | 4 | {electrophysiology} |
dimbl | 4 | {linguistics} |
etsf-io | 4 | {nanoscale-physics,physics} |
- hpcc | 4 | {numericalcomputation,distributedcomputing} |
+ harp | 4 | {meteorology} |
+ hpcc | 4 | {distributedcomputing,numericalcomputation} |
libcgns | 4 | {engineering-dev} |
libgetdata | 4 | {dataacquisition} |
+ libmatheval | 4 | {mathematics-dev} |
+ psurface | 4 | {numericalcomputation} |
ratpoints | 4 | {mathematics-dev} |
taurus | 4 | {dataacquisition} |
timbl | 4 | {linguistics} |
@@ -121,26 +120,27 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
clhep | 3 | {highenergy-physics-dev} |
coda | 3 | {meteorology-dev} |
code-saturne | 3 | {engineering-dev,mathematics-dev} |
- debian-science | 3 | {economics} |
- debian-science | 3 | {nanoscale-physics-dev} |
debian-science | 3 | {psychophysics} |
+ debian-science | 3 | {nanoscale-physics-dev} |
+ debian-science | 3 | {economics} |
dune-localfunctions | 3 | {mathematics-dev} |
fastjet | 3 | {highenergy-physics-dev} |
- jhdf | 3 | {engineering-dev} |
jhdf | 3 | {engineering} |
+ jhdf | 3 | {engineering-dev} |
libgetdata | 3 | {dataacquisition-dev} |
libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
looptools | 3 | {highenergy-physics} |
mbt | 3 | {linguistics} |
- metis-edf | 3 | {numericalcomputation,engineering} |
+ metis-edf | 3 | {engineering,numericalcomputation} |
morse-simulator | 3 | {robotics} |
+ neuron | 3 | {highenergy-physics-dev} |
newmat | 3 | {mathematics-dev} |
- openmx | 3 | {physics,nanoscale-physics} |
+ openmx | 3 | {nanoscale-physics,physics} |
openstereogram | 3 | {tools} |
qwtplot3d | 3 | {viewing-dev} |
ros-opencv-apps | 3 | {robotics} |
sardana | 3 | {dataacquisition} |
- simbody | 3 | {robotics-dev} |
+ x13as | 3 | {economics} |
apophenia | 2 | {statistics} |
cbflib | 2 | {nanoscale-physics-dev} |
cernlib | 2 | {highenergy-physics} |
@@ -148,8 +148,8 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
coda | 2 | {meteorology} |
cqrlib | 2 | {mathematics-dev} |
cvector | 2 | {mathematics-dev} |
- debian-science | 2 | {neuroscience-cognitive} |
debian-science | 2 | {physics} |
+ debian-science | 2 | {neuroscience-cognitive} |
gemmlowp | 2 | {mathematics-dev} |
itsol | 2 | {mathematics-dev} |
libgetdata | 2 | {dataacquisition-dev} |
@@ -158,9 +158,9 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
looptools | 2 | {highenergy-physics-dev} |
mbtserver | 2 | {linguistics} |
neartree | 2 | {numericalcomputation,mathematics-dev} |
+ simbody | 2 | {robotics-dev} |
sparskit | 2 | {mathematics-dev} |
tango | 2 | {dataacquisition-dev} |
- x13as | 2 | {economics} |
apriltag | 1 | {robotics-dev} |
asl | 1 | {physics-dev} |
cernlib | 1 | {highenergy-physics} |
@@ -170,28 +170,25 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
frogdata | 1 | {linguistics} |
libccp4 | 1 | {nanoscale-physics-dev} |
libdogleg | 1 | {mathematics-dev} |
- liblxi | 1 | {dataacquisition-dev,engineering-dev} |
+ liblxi | 1 | {engineering-dev,dataacquisition-dev} |
liborigin2 | 1 | {viewing-dev} |
libxsmm | 1 | {mathematics-dev} |
mrmpi | 1 | {tools} |
ompl | 1 | {robotics-dev} |
openigtlink | 1 | {robotics-dev} |
- openturns | 1 | {mathematics,statistics,engineering,meteorology-dev,mathematics-dev,meteorology} |
+ openturns | 1 | {statistics,engineering,meteorology,mathematics,mathematics-dev,meteorology-dev} |
pycollada | 1 | {engineering-dev} |
pynac | 1 | {mathematics-dev} |
python-aws-xray-sdk | 1 | {dataacquisition-dev} |
quadrule | 1 | {mathematics-dev} |
ssm | 1 | {nanoscale-physics} |
tamuanova | 1 | {statistics} |
- tango | 1 | {dataacquisition} |
tango | 1 | {dataacquisition-dev} |
+ tango | 1 | {dataacquisition} |
apertium-afr-nld | 0 | {linguistics} |
apertium-bel-rus | 0 | {linguistics} |
apertium-en-es | 0 | {linguistics} |
- apertium-eo-es | 0 | {linguistics} |
apertium-es-ast | 0 | {linguistics} |
- apertium-eu-es | 0 | {linguistics} |
- apertium-hbs-mkd | 0 | {linguistics} |
apertium-hin | 0 | {linguistics} |
apertium-isl | 0 | {linguistics} |
apertium-is-sv | 0 | {linguistics} |
@@ -199,7 +196,6 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
apertium-mk-bg | 0 | {linguistics} |
apertium-mlt-ara | 0 | {linguistics} |
apertium-nno-nob | 0 | {linguistics} |
- apertium-oc-ca | 0 | {linguistics} |
apertium-por-cat | 0 | {linguistics} |
apertium-sme-nob | 0 | {linguistics} |
apertium-spa | 0 | {linguistics} |
@@ -208,10 +204,10 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
apertium-urd | 0 | {linguistics} |
apertium-urd-hin | 0 | {linguistics} |
calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
- calculix-ccx-test | 0 | {simulations,engineering,numericalcomputation} |
+ calculix-ccx-test | 0 | {simulations,numericalcomputation,engineering} |
cernlib | 0 | {highenergy-physics-dev} |
- cernlib | 0 | {highenergy-physics} |
cernlib | 0 | {highenergy-physics,physics} |
+ cernlib | 0 | {highenergy-physics} |
ckon | 0 | {highenergy-physics-dev} |
clhep | 0 | {highenergy-physics-dev} |
coda | 0 | {meteorology-dev} |
@@ -236,7 +232,7 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
openturns | 0 | {engineering-dev,meteorology-dev,mathematics-dev} |
psurface | 0 | {numericalcomputation} |
- python-escript | 0 | {simulations,engineering,numericalcomputation} |
+ python-escript | 0 | {engineering,simulations,numericalcomputation} |
qrupdate | 0 | {mathematics-dev} |
robot-testing-framework | 0 | {robotics-dev} |
ros-metapackages | 0 | {robotics} |
@@ -247,12 +243,12 @@ Last-Update: Sat, 11 Jun 2022 01:42:04 +0000
sagemath-database-graphs | 0 | {mathematics} |
sagemath-database-polytopes | 0 | {mathematics} |
siscone | 0 | {highenergy-physics-dev} |
- slicot | 0 | {robotics-dev,engineering-dev} |
+ slicot | 0 | {engineering-dev,robotics-dev} |
ssm | 0 | {nanoscale-physics-dev} |
tachyon | 0 | {mathematics} |
triangle | 0 | {physics-dev} |
- trilinos | 0 | {physics-dev,mathematics-dev,engineering-dev} |
+ trilinos | 0 | {engineering-dev,physics-dev,mathematics-dev} |
visp-images | 0 | {robotics-dev} |
vlfeat | 0 | {imageanalysis-dev} |
-(286 rows)
+(282 rows)
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/9cd63a2cd9a2c06b53cc2504e83395fc34027c87
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