Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
f1bf3d1c by Andreas Tille at 2022-06-12T03:37:45+00:00
automatic update
- - - - -
3 changed files:
- debian-med-tests.txt
- debian-science-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,194 +1,2 @@
-Last-Update: Sat, 11 Jun 2022 13:42:04 +0000
-
- Source | Vote | Tasks | Tags
--------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 169 | {covid-19,imaging} |
- orthanc | 96 | {imaging,covid-19,practice} |
- orthanc-wsi | 49 | {covid-19,imaging,his,laboratory,oncology,practice} |
- node-shiny-server | 42 | {covid-19,epi} |
- amide | 24 | {imaging} |
- dicomscope | 21 | {imaging} |
- dicom3tools | 20 | {imaging} |
- orthanc-webviewer | 17 | {imaging} |
- gnumed-server | 14 | {practice,covid-19} |
- gdcm | 12 | {imaging-dev} |
- invesalius | 12 | {imaging} |
- orthanc-dicomweb | 12 | {covid-19,imaging} |
- biojava-live | 10 | {bio-dev} |
- gdcm | 10 | {imaging,covid-19} |
- nipype | 10 | {imaging-dev,imaging} |
- pixelmed | 8 | {imaging} |
- adun.app | 7 | {bio} |
- librg-utils-perl | 7 | {bio} |
- mrtrix3 | 7 | {imaging} |
- orthanc-postgresql | 7 | {imaging} |
- jebl2 | 6 | {bio-dev} |
- libminc | 6 | {imaging-dev} |
- nifti2dicom | 6 | {imaging} |
- treeview | 6 | {bio,bio-phylogeny} |
- bio-tradis | 5 | {bio,bio-dev} |
- canu | 5 | {bio} |
- elastix | 5 | {imaging} |
- obitools | 5 | {bio} |
- orthanc-gdcm | 5 | {imaging} |
- orthanc-mysql | 5 | {imaging} |
- plastimatch | 5 | {imaging} |
- pymia | 5 | {imaging-dev} |
- salmon | 5 | {bio,covid-19} |
- staden | 5 | {bio} |
- cmtk | 4 | {imaging} |
- getdata | 4 | {bio} |
- ghmm | 4 | {bio} |
- king | 4 | {typesetting,imaging} |
- lamarc | 4 | {bio} |
- libncl | 4 | {bio} |
- libsbml | 4 | {bio-dev} |
- mia | 4 | {imaging} |
- oscar | 4 | {tools,practice,data} |
- python-wdlparse | 4 | {bio-dev} |
- rdp-alignment | 4 | {bio} |
- runcircos-gui | 4 | {bio} |
- saint | 4 | {bio} |
- sibsim4 | 4 | {cloud,bio} |
- spread-phy | 4 | {bio,bio-phylogeny} |
- stacks | 4 | {bio} |
- anfo | 3 | {cloud,bio} |
- arden | 3 | {bio,cloud} |
- assemblytics | 3 | {bio} |
- bart-view | 3 | {imaging} |
- beast-mcmc | 3 | {bio,bio-phylogeny} |
- biomaj3-cli | 3 | {cloud} |
- bitseq | 3 | {bio} |
- blimps | 3 | {bio} |
- brig | 3 | {bio} |
- cat-bat | 3 | {covid-19,bio} |
- clonalframeml | 3 | {covid-19,bio} |
- clonalorigin | 3 | {bio} |
- delly | 3 | {bio,covid-19} |
- dicompyler | 3 | {oncology} |
- embassy-domainatrix | 3 | {bio,cloud} |
- fastml | 3 | {bio} |
- gatb-core | 3 | {bio} |
- hinge | 3 | {bio} |
- ipig | 3 | {bio} |
- jmodeltest | 3 | {bio-phylogeny,bio} |
- libbio-mage-utils-perl | 3 | {bio-dev} |
- libdivsufsort | 3 | {bio-dev} |
- libpal-java | 3 | {bio-dev} |
- librdp-taxonomy-tree-java | 3 | {bio-dev} |
- mauve-aligner | 3 | {bio} |
- melting | 3 | {bio,cloud} |
- mhap | 3 | {bio,bio-ngs} |
- phyutility | 3 | {bio,cloud} |
- piler | 3 | {bio} |
- placnet | 3 | {bio} |
- rambo-k | 3 | {bio} |
- rdp-classifier | 3 | {bio} |
- rtax | 3 | {cloud,bio} |
- sga | 3 | {bio} |
- sift | 3 | {bio} |
- soapaligner | 3 | {bio} |
- soapsnp | 3 | {bio} |
- sprai | 3 | {bio} |
- suitename | 3 | {bio} |
- surankco | 3 | {bio} |
- trace2dbest | 3 | {bio} |
- tracetuner | 3 | {bio} |
- tvc | 3 | {bio} |
- zalign | 3 | {cloud,bio} |
- dextractor | 2 | {covid-19,bio} |
- embassy-domalign | 2 | {bio,cloud} |
- embassy-domsearch | 2 | {bio,cloud} |
- emmax | 2 | {bio} |
- htscodecs | 2 | {bio-dev,covid-19} |
- kmerresistance | 2 | {bio} |
- libchado-perl | 2 | {bio-dev} |
- libgenome | 2 | {bio-dev} |
- metaphlan2 | 2 | {bio} |
- orthanc-python | 2 | {covid-19} |
- papyrus | 2 | {imaging-dev} |
- plasmidseeker | 2 | {bio} |
- proalign | 2 | {bio,bio-phylogeny} |
- pscan-chip | 2 | {bio} |
- qcumber | 2 | {bio} |
- skesa | 2 | {bio} |
- thesias | 2 | {bio,covid-19} |
- tophat-recondition | 2 | {covid-19,bio} |
- varna | 2 | {bio} |
- acedb | 1 | {bio,cloud} |
- bambamc | 1 | {bio-dev} |
- ctn | 1 | {imaging-dev} |
- cufflinks | 1 | {cloud,bio} |
- cutesv | 1 | {bio} |
- emboss-explorer | 1 | {bio} |
- emperor | 1 | {bio} |
- gatb-core | 1 | {bio-dev} |
- insighttoolkit5 | 1 | {imaging-dev} |
- libbigwig | 1 | {bio-dev} |
- libbpp-core | 1 | {bio-dev} |
- libbpp-phyl | 1 | {bio-dev} |
- libbpp-phyl-omics | 1 | {bio-dev} |
- libbpp-popgen | 1 | {bio-dev} |
- libbpp-raa | 1 | {bio-dev} |
- libbpp-seq | 1 | {bio-dev} |
- libbpp-seq-omics | 1 | {bio-dev} |
- libctapimkt | 1 | {practice} |
- libgkarrays | 1 | {bio-dev} |
- libhmsbeagle | 1 | {bio-dev} |
- libmems | 1 | {bio-dev} |
- libmuscle | 1 | {bio-dev} |
- libxdf | 1 | {imaging-dev} |
- microbegps | 1 | {bio} |
- mssstest | 1 | {tools} |
- opencfu | 1 | {laboratory} |
- pbseqlib | 1 | {bio-dev} |
- pigx-rnaseq | 1 | {bio,covid-19} |
- pique | 1 | {bio} |
- plasmidid | 1 | {bio,covid-19} |
- pplacer | 1 | {covid-19,bio,bio-phylogeny} |
- seq-gen | 1 | {bio} |
- srf | 1 | {bio-dev} |
- tipp | 1 | {covid-19,bio} |
- varscan | 1 | {bio,covid-19} |
- vienna-rna | 1 | {bio,covid-19} |
- biojava4-live | 0 | {bio-dev} |
- biosyntax | 0 | {bio} |
- camp | 0 | {imaging-dev} |
- eegdev | 0 | {imaging-dev} |
- fis-gtm | 0 | {his} |
- libbioparser-dev | 0 | {bio-dev} |
- libics | 0 | {imaging-dev,covid-19} |
- libjloda-java | 0 | {bio-dev} |
- libmialm | 0 | {imaging-dev} |
- libncl | 0 | {bio-dev} |
- libpsortb | 0 | {bio-dev} |
- libqes | 0 | {bio-dev} |
- libseqlib | 0 | {bio-dev} |
- libstatgen | 0 | {bio-dev} |
- libvistaio | 0 | {imaging-dev} |
- megadepth | 0 | {bio} |
- metastudent-data | 0 | {bio} |
- metastudent-data-2 | 0 | {bio} |
- mia | 0 | {imaging-dev} |
- miaviewit | 0 | {imaging-dev} |
- milib | 0 | {bio-dev,covid-19} |
- ncbi-vdb | 0 | {bio-dev} |
- orthanc-imagej | 0 | {imaging} |
- pbcopper | 0 | {bio-dev} |
- pbseqlib | 0 | {bio-dev} |
- provean | 0 | {bio} |
- python-seqcluster | 0 | {bio-dev,covid-19} |
- python-seqcluster | 0 | {bio} |
- resfinder-db | 0 | {bio} |
- sbmltoolbox | 0 | {bio-dev} |
- simpleitk | 0 | {imaging-dev} |
- smrtanalysis | 0 | {bio,covid-19} |
- xdffileio | 0 | {imaging-dev} |
- xxsds-dynamic | 0 | {bio-dev} |
- libmaus2 | -1 | {bio-dev,covid-19} |
- malt | -1 | {bio} |
- megan-ce | -1 | {bio} |
- rockhopper | -1 | {bio} |
- sight | -1 | {imaging-dev} |
-(218 rows)
+Last-Update: Sun, 12 Jun 2022 01:42:04 +0000
=====================================
debian-science-tests.txt
=====================================
@@ -1,254 +1,2 @@
-Last-Update: Sat, 11 Jun 2022 13:42:04 +0000
-
- Source | Vote | Tasks | Tags
------------------------------------------+--------+----------------------------------------------------------------------------------+--------------------------------------------------------------------
- gts | 2930 | {viewing} |
- sympy | 1844 | {nanoscale-physics,physics} |
- armadillo | 194 | {mathematics-dev} |
- suitesparse | 144 | {mathematics-dev,numericalcomputation} |
- python-pyqtgraph | 133 | {viewing} |
- atlas | 89 | {mathematics-dev} |
- nltk | 80 | {linguistics} |
- arpack | 69 | {mathematics-dev} |
- cypari2 | 50 | {mathematics-dev} |
- pyzo | 50 | {numericalcomputation} |
- imview | 46 | {viewing} |
- arduino-mk | 40 | {robotics} |
- fftw | 36 | {physics-dev,mathematics-dev,meteorology-dev} |
- rubiks | 36 | {geometry,mathematics} |
- eclib | 35 | {mathematics} |
- flintqs | 35 | {mathematics} |
- sketch | 27 | {typesetting} |
- feedgnuplot | 23 | {viewing} |
- cernlib | 22 | {highenergy-physics} |
- bossa | 20 | {devices} |
- flann | 19 | {mathematics-dev,engineering-dev} |
- fftw | 18 | {meteorology-dev,mathematics-dev,physics-dev} |
- geg | 18 | {viewing} |
- neuron | 18 | {simulations,highenergy-physics,neuroscience-modeling} |
- vitables | 18 | {numericalcomputation} |
- cernlib | 16 | {highenergy-physics-dev} |
- gts | 16 | {viewing-dev} |
- libmatio | 16 | {mathematics-dev} |
- ppl | 15 | {numericalcomputation} |
- guidata | 14 | {dataacquisition-dev} |
- ntl | 14 | {mathematics-dev} |
- opencascade | 14 | {simulations} |
- picosat | 14 | {logic} |
- auto-07p | 13 | {mathematics} |
- coinor-symphony | 13 | {logic,numericalcomputation,mathematics} |
- form | 13 | {mathematics} |
- mathgl | 13 | {viewing} |
- scalapack | 13 | {nanoscale-physics-dev} |
- getdp | 12 | {engineering,simulations,mathematics} |
- gfsview | 12 | {viewing} |
- guiqwt | 12 | {viewing,numericalcomputation} |
- libm4ri | 12 | {mathematics-dev} |
- neuron | 12 | {highenergy-physics-dev} |
- polylib | 12 | {mathematics} |
- apophenia | 11 | {statistics} |
- dune-uggrid | 11 | {mathematics-dev} |
- ipe-tools | 11 | {typesetting} |
- opticalraytracer | 11 | {physics} |
- cliquer | 10 | {mathematics} |
- debian-science | 10 | {mathematics,economics,machine-learning,physics,nanoscale-physics} |
- pcl | 10 | {robotics-dev} |
- rheolef | 10 | {mathematics} |
- ros-ros-environment | 10 | {robotics-dev} |
- syrthes | 10 | {engineering} |
- alberta | 9 | {engineering-dev} |
- debian-science | 9 | {economics,statistics,nanoscale-physics,physics} |
- debian-science | 9 | {neuroscience-cognitive,machine-learning} |
- jeuclid | 9 | {typesetting,viewing} |
- libcgns | 9 | {engineering} |
- lxi-tools | 9 | {dataacquisition,engineering} |
- scram | 9 | {engineering} |
- tango | 9 | {dataacquisition} |
- uctodata | 9 | {linguistics} |
- libm4rie | 8 | {mathematics-dev} |
- lrcalc | 8 | {mathematics} |
- opencascade | 8 | {simulations} |
- python-escript | 8 | {numericalcomputation,simulations,engineering} |
- ros-rosconsole | 8 | {robotics-dev} |
- toulbar2 | 8 | {logic,numericalcomputation,mathematics,physics} |
- ucto | 8 | {linguistics} |
- cliquer | 7 | {mathematics-dev} |
- iml | 7 | {mathematics-dev} |
- libmatheval | 7 | {mathematics} |
- libzn-poly | 7 | {mathematics-dev} |
- matlab-support | 7 | {numericalcomputation,mathematics} |
- code-saturne | 6 | {mathematics-dev,engineering-dev} |
- debian-science | 6 | {economics,physics,nanoscale-physics,machine-learning} |
- dune-istl | 6 | {mathematics-dev} |
- dxflib | 6 | {engineering-dev} |
- dxsamples | 6 | {nanoscale-physics} |
- eclib | 6 | {mathematics-dev} |
- libhomfly | 6 | {mathematics-dev} |
- libitpp | 6 | {engineering-dev,mathematics-dev} |
- libvigraimpex | 6 | {imageanalysis-dev,machine-learning} |
- urdfdom-headers | 6 | {robotics-dev} |
- cimg | 5 | {imageanalysis-dev} | {x11::library}
- coinmp | 5 | {mathematics-dev,logic,numericalcomputation} |
- frog | 5 | {linguistics} |
- gf2x | 5 | {mathematics-dev} |
- ipe-tools | 5 | {typesetting} |
- irstlm | 5 | {linguistics} |
- lrcalc | 5 | {mathematics-dev} |
- muparser | 5 | {mathematics-dev} |
- qd | 5 | {mathematics-dev} |
- sac2mseed | 5 | {geography} |
- tango | 5 | {dataacquisition} |
- teem | 5 | {imageanalysis} |
- apertium-streamparser | 4 | {linguistics} |
- astk | 4 | {engineering} |
- cbflib | 4 | {nanoscale-physics} |
- debian-science | 4 | {tools} |
- debian-science | 4 | {electrophysiology} |
- dimbl | 4 | {linguistics} |
- etsf-io | 4 | {nanoscale-physics,physics} |
- harp | 4 | {meteorology} |
- hpcc | 4 | {distributedcomputing,numericalcomputation} |
- libcgns | 4 | {engineering-dev} |
- libgetdata | 4 | {dataacquisition} |
- libmatheval | 4 | {mathematics-dev} |
- psurface | 4 | {numericalcomputation} |
- ratpoints | 4 | {mathematics-dev} |
- taurus | 4 | {dataacquisition} |
- timbl | 4 | {linguistics} |
- timblserver | 4 | {linguistics} |
- cernlib | 3 | {highenergy-physics} |
- clhep | 3 | {highenergy-physics-dev} |
- coda | 3 | {meteorology-dev} |
- code-saturne | 3 | {engineering-dev,mathematics-dev} |
- debian-science | 3 | {psychophysics} |
- debian-science | 3 | {nanoscale-physics-dev} |
- debian-science | 3 | {economics} |
- dune-localfunctions | 3 | {mathematics-dev} |
- fastjet | 3 | {highenergy-physics-dev} |
- jhdf | 3 | {engineering} |
- jhdf | 3 | {engineering-dev} |
- libgetdata | 3 | {dataacquisition-dev} |
- libgtkdatabox | 3 | {engineering-dev,viewing-dev} |
- looptools | 3 | {highenergy-physics} |
- mbt | 3 | {linguistics} |
- metis-edf | 3 | {engineering,numericalcomputation} |
- morse-simulator | 3 | {robotics} |
- neuron | 3 | {highenergy-physics-dev} |
- newmat | 3 | {mathematics-dev} |
- openmx | 3 | {nanoscale-physics,physics} |
- openstereogram | 3 | {tools} |
- qwtplot3d | 3 | {viewing-dev} |
- ros-opencv-apps | 3 | {robotics} |
- sardana | 3 | {dataacquisition} |
- x13as | 3 | {economics} |
- apophenia | 2 | {statistics} |
- cbflib | 2 | {nanoscale-physics-dev} |
- cernlib | 2 | {highenergy-physics} |
- cld2 | 2 | {linguistics} |
- coda | 2 | {meteorology} |
- cqrlib | 2 | {mathematics-dev} |
- cvector | 2 | {mathematics-dev} |
- debian-science | 2 | {physics} |
- debian-science | 2 | {neuroscience-cognitive} |
- gemmlowp | 2 | {mathematics-dev} |
- itsol | 2 | {mathematics-dev} |
- libgetdata | 2 | {dataacquisition-dev} |
- liblbfgs | 2 | {mathematics-dev} |
- libvigraimpex | 2 | {imageanalysis-dev,machine-learning} |
- looptools | 2 | {highenergy-physics-dev} |
- mbtserver | 2 | {linguistics} |
- neartree | 2 | {numericalcomputation,mathematics-dev} |
- simbody | 2 | {robotics-dev} |
- sparskit | 2 | {mathematics-dev} |
- tango | 2 | {dataacquisition-dev} |
- apriltag | 1 | {robotics-dev} |
- asl | 1 | {physics-dev} |
- cernlib | 1 | {highenergy-physics} |
- clipper | 1 | {nanoscale-physics-dev} |
- coda | 1 | {meteorology-dev} |
- collada-dom | 1 | {viewing-dev} |
- frogdata | 1 | {linguistics} |
- libccp4 | 1 | {nanoscale-physics-dev} |
- libdogleg | 1 | {mathematics-dev} |
- liblxi | 1 | {engineering-dev,dataacquisition-dev} |
- liborigin2 | 1 | {viewing-dev} |
- libxsmm | 1 | {mathematics-dev} |
- mrmpi | 1 | {tools} |
- ompl | 1 | {robotics-dev} |
- openigtlink | 1 | {robotics-dev} |
- openturns | 1 | {statistics,engineering,meteorology,mathematics,mathematics-dev,meteorology-dev} |
- pycollada | 1 | {engineering-dev} |
- pynac | 1 | {mathematics-dev} |
- python-aws-xray-sdk | 1 | {dataacquisition-dev} |
- quadrule | 1 | {mathematics-dev} |
- ssm | 1 | {nanoscale-physics} |
- tamuanova | 1 | {statistics} |
- tango | 1 | {dataacquisition-dev} |
- tango | 1 | {dataacquisition} |
- apertium-afr-nld | 0 | {linguistics} |
- apertium-bel-rus | 0 | {linguistics} |
- apertium-en-es | 0 | {linguistics} |
- apertium-es-ast | 0 | {linguistics} |
- apertium-hin | 0 | {linguistics} |
- apertium-isl | 0 | {linguistics} |
- apertium-is-sv | 0 | {linguistics} |
- apertium-ita | 0 | {linguistics} |
- apertium-mk-bg | 0 | {linguistics} |
- apertium-mlt-ara | 0 | {linguistics} |
- apertium-nno-nob | 0 | {linguistics} |
- apertium-por-cat | 0 | {linguistics} |
- apertium-sme-nob | 0 | {linguistics} |
- apertium-spa | 0 | {linguistics} |
- apertium-swe-dan | 0 | {linguistics} |
- apertium-swe-nor | 0 | {linguistics} |
- apertium-urd | 0 | {linguistics} |
- apertium-urd-hin | 0 | {linguistics} |
- calculix-ccx-doc | 0 | {simulations,numericalcomputation,engineering} |
- calculix-ccx-test | 0 | {simulations,numericalcomputation,engineering} |
- cernlib | 0 | {highenergy-physics-dev} |
- cernlib | 0 | {highenergy-physics,physics} |
- cernlib | 0 | {highenergy-physics} |
- ckon | 0 | {highenergy-physics-dev} |
- clhep | 0 | {highenergy-physics-dev} |
- coda | 0 | {meteorology-dev} |
- code-saturne | 0 | {engineering} |
- dune-functions | 0 | {mathematics-dev} |
- dune-grid-glue | 0 | {mathematics-dev} |
- dune-pdelab | 0 | {mathematics-dev} |
- dune-typetree | 0 | {mathematics-dev} |
- etsf-io | 0 | {nanoscale-physics-dev} |
- fastjet | 0 | {highenergy-physics-dev} |
- glpk-java | 0 | {mathematics-dev} |
- libfolia | 0 | {linguistics} |
- libgetdata | 0 | {dataacquisition-dev} |
- libquantum | 0 | {numericalcomputation} |
- librsl | 0 | {meteorology-dev} |
- libsdsl | 0 | {dataacquisition-dev} |
- looptools | 0 | {highenergy-physics-dev} |
- mclibs | 0 | {highenergy-physics} |
- metis-edf | 0 | {engineering-dev} |
- ompl | 0 | {robotics} |
- openctm | 0 | {physics-dev} |
- openturns | 0 | {engineering-dev,mathematics-dev,meteorology-dev} |
- openturns | 0 | {engineering-dev,meteorology-dev,mathematics-dev} |
- psurface | 0 | {numericalcomputation} |
- python-escript | 0 | {engineering,simulations,numericalcomputation} |
- qrupdate | 0 | {mathematics-dev} |
- robot-testing-framework | 0 | {robotics-dev} |
- ros-metapackages | 0 | {robotics} |
- ros-metapackages | 0 | {robotics-dev} |
- sagemath-database-combinatorial-designs | 0 | {mathematics} |
- sagemath-database-conway-polynomials | 0 | {mathematics} |
- sagemath-database-elliptic-curves | 0 | {mathematics} |
- sagemath-database-graphs | 0 | {mathematics} |
- sagemath-database-polytopes | 0 | {mathematics} |
- siscone | 0 | {highenergy-physics-dev} |
- slicot | 0 | {engineering-dev,robotics-dev} |
- ssm | 0 | {nanoscale-physics-dev} |
- tachyon | 0 | {mathematics} |
- triangle | 0 | {physics-dev} |
- trilinos | 0 | {engineering-dev,physics-dev,mathematics-dev} |
- visp-images | 0 | {robotics-dev} |
- vlfeat | 0 | {imageanalysis-dev} |
-(282 rows)
+Last-Update: Sun, 12 Jun 2022 03:36:47 +0000
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f1bf3d1c3167c32f8bd2c193338c07c9620542ff
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