[med-svn] [Git][med-team/phyml][master] 7 commits: routine-update: New upstream version

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / phyml


Commits:
33834452 by Étienne Mollier at 2022-05-08T16:02:01+02:00
routine-update: New upstream version

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762d2370 by Étienne Mollier at 2022-05-08T16:02:02+02:00
New upstream version 3.3.20220408
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69dec87e by Étienne Mollier at 2022-05-08T16:02:07+02:00
Update upstream source from tag 'upstream/3.3.20220408'

Update to upstream version '3.3.20220408'
with Debian dir 4f5d6f0cfcb569a07b7bea14e44b79abe84c93f0
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59f63fa0 by Étienne Mollier at 2022-05-08T16:13:39+02:00
Refresh no-configure-ac-date.patch.

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a003c5b0 by Étienne Mollier at 2022-05-08T16:14:16+02:00
Refresh fix_declaration_of_temp.patch.

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bc7e4aa1 by Étienne Mollier at 2022-05-08T16:14:49+02:00
Refresh filter-sse3-intrinsics.patch.

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834f0a09 by Étienne Mollier at 2022-05-08T16:16:34+02:00
Refresh typos.patch.

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25 changed files:

- configure.ac
- debian/changelog
- debian/patches/filter-sse3-intrinsics.patch
- debian/patches/fix_declaration_of_temp.patch
- debian/patches/no-configure-ac-date.patch
- debian/patches/typos.patch
- doc/phyml-manual.pdf
- doc/phyml-manual.tex
- src/cl.c
- src/eigen.c
- src/help.c
- src/init.c
- src/interface.c
- src/io.c
- src/location.c
- src/make.c
- src/mcmc.c
- src/mixt.c
- src/models.c
- src/models.h
- src/optimiz.c
- src/optimiz.h
- src/phyrex.c
- src/rates.c
- src/rates.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/phyml/-/compare/81ee3bc6b767da56cedf17e37a786cfb1e00ae62...834f0a098715b5b6af3e1088031da8baafa2b65c

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View it on GitLab: https://salsa.debian.org/med-team/phyml/-/compare/81ee3bc6b767da56cedf17e37a786cfb1e00ae62...834f0a098715b5b6af3e1088031da8baafa2b65c
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