[med-svn] [Git][med-team/hyphy][upstream] New upstream version 2.5.39+dfsg

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / hyphy


Commits:
9c72fc4c by Étienne Mollier at 2022-05-31T19:37:32+02:00
New upstream version 2.5.39+dfsg
- - - - -


30 changed files:

- CMakeLists.txt
- res/TemplateBatchFiles/BGM.bf
- res/TemplateBatchFiles/CleanStopCodons.bf
- res/TemplateBatchFiles/GARD.bf
- res/TemplateBatchFiles/SelectionAnalyses/BUSTED.bf
- res/TemplateBatchFiles/SelectionAnalyses/PRIME.bf
- res/TemplateBatchFiles/SelectionAnalyses/RELAX.bf
- res/TemplateBatchFiles/SelectionAnalyses/modules/io_functions.ibf
- res/TemplateBatchFiles/SelectionAnalyses/modules/shared-load-file.bf
- res/TemplateBatchFiles/libv3/IOFunctions.bf
- res/TemplateBatchFiles/libv3/UtilityFunctions.bf
- res/TemplateBatchFiles/libv3/models/parameters.bf
- res/TemplateBatchFiles/libv3/tasks/ancestral.bf
- res/TemplateBatchFiles/libv3/tasks/estimators.bf
- res/TemplateBatchFiles/libv3/tasks/trees.bf
- src/core/associative_list.cpp
- src/core/avllistx.cpp
- src/core/batchlan.cpp
- src/core/batchlan2.cpp
- src/core/batchlanruntime.cpp
- src/core/calcnode.cpp
- src/core/formula.cpp
- src/core/fstring.cpp
- src/core/global_things.cpp
- src/core/include/associative_list.h
- src/core/include/baseobj.h
- src/core/include/batchlan.h
- src/core/include/calcnode.h
- src/core/include/dataset_filter.h
- src/core/include/formula.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/commit/9c72fc4cabab3a481e471c113ada4812bfb6b2ea

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