[med-svn] [Git][med-team/python-cogent][master] 3 commits: routine-update: New upstream version

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / python-cogent


Commits:
e26980f8 by Andreas Tille at 2022-09-29T09:27:12+02:00
routine-update: New upstream version

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c16e41e7 by Andreas Tille at 2022-09-29T09:27:13+02:00
New upstream version 2022.8.24a1+dfsg
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55d3f2d0 by Andreas Tille at 2022-09-29T09:27:17+02:00
Update upstream source from tag 'upstream/2022.8.24a1+dfsg'

Update to upstream version '2022.8.24a1+dfsg'
with Debian dir 347923e923d81f25418ca08bc7975536091abd62
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30 changed files:

- + .github/ISSUE_TEMPLATE/bug_report.md
- + .github/ISSUE_TEMPLATE/custom.md
- + .github/ISSUE_TEMPLATE/feature_request.md
- .hgtags
- + .sourcery.yaml
- + CODE_OF_CONDUCT.md
- + CONTRIBUTING.md
- README.md
- changelog.md
- debian/changelog
- doc/conf.py
- pyproject.toml
- requirements.txt
- src/cogent3/__init__.py
- src/cogent3/align/__init__.py
- src/cogent3/align/align.py
- src/cogent3/align/compare_numba.py
- src/cogent3/align/dp_calculation.py
- src/cogent3/align/indel_model.py
- src/cogent3/align/indel_positions.py
- src/cogent3/align/pairwise.py
- src/cogent3/align/pairwise_pogs_numba.py
- src/cogent3/align/pairwise_seqs_numba.py
- src/cogent3/align/progressive.py
- src/cogent3/align/pycompare.py
- src/cogent3/align/traceback.py
- src/cogent3/app/__init__.py
- src/cogent3/app/align.py
- src/cogent3/app/composable.py
- src/cogent3/app/data_store.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-cogent/-/compare/9d9609904f8dc14e04a9c7286410f1bb307f79a1...55d3f2d01b5568707e61ba86ae57254c3e971475

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View it on GitLab: https://salsa.debian.org/med-team/python-cogent/-/compare/9d9609904f8dc14e04a9c7286410f1bb307f79a1...55d3f2d01b5568707e61ba86ae57254c3e971475
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