[med-svn] [Git][med-team/python-skbio][master] 9 commits: routine-update: New upstream version

[Andreas Tille (@tille)]

Andreas Tille pushed to branch master at Debian Med / python-skbio


Commits:
464f3960 by Andreas Tille at 2023-12-09T10:31:25+01:00
routine-update: New upstream version

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4bfe35e1 by Andreas Tille at 2023-12-09T10:31:26+01:00
New upstream version 0.5.9
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e4efa0dd by Andreas Tille at 2023-12-09T10:31:34+01:00
Update upstream source from tag 'upstream/0.5.9'

Update to upstream version '0.5.9'
with Debian dir 93fd9afe4b48137c8b21ac421afee315ca761810
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74e1da4b by Andreas Tille at 2023-12-09T10:31:44+01:00
routine-update: Build-Depends: s/dh-python/dh-sequence-python3/

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af0b0190 by Andreas Tille at 2023-12-09T10:31:47+01:00
Remove patch numpy-1.24_32bit.patch that is missing from debian/patches/series.

Changes-By: lintian-brush
Fixes: lintian: patch-file-present-but-not-mentioned-in-series
See-also: https://lintian.debian.org/tags/patch-file-present-but-not-mentioned-in-series.html

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9fe4df4d by Andreas Tille at 2023-12-09T10:31:51+01:00
Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.

Changes-By: lintian-brush

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ca4018bb by Andreas Tille at 2023-12-09T11:06:12+01:00
Refresh patches

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e29fd200 by Andreas Tille at 2023-12-09T11:06:43+01:00
Fix broken formatting from lintian-brush

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e0d98b53 by Andreas Tille at 2023-12-09T11:34:42+01:00
Revert brocken lintian-brush change

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29 changed files:

- + .github/CONTRIBUTING.md
- + .github/PULL_REQUEST_TEMPLATE.md
- + .github/workflows/ci.yml
- + .github/workflows/release.yml
- CHANGELOG.md
- README.rst
- ci/aarch64.conda_requirements.txt
- ci/conda_requirements.txt
- debian/changelog
- debian/control
- debian/patches/local_inventory
- debian/patches/numpy-1.24.patch
- − debian/patches/numpy-1.24_32bit.patch
- debian/rules
- debian/upstream/metadata
- doc/source/conf.py
- pyproject.toml
- setup.py
- simde-sse2.h
- skbio/__init__.py
- + skbio/alignment/_ssw_wrapper.c
- skbio/alignment/_ssw_wrapper.pyx
- skbio/alignment/_tabular_msa.py
- skbio/alignment/tests/test_tabular_msa.py
- skbio/diversity/__init__.py
- + skbio/diversity/_phylogenetic.c
- skbio/diversity/alpha/_gini.py
- skbio/diversity/alpha/tests/test_gini.py
- skbio/io/_iosources.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/compare/88adc7cb5a9f1c6561b2c40f8a3ce36ebd705b90...e0d98b5376728c4f57b1aca5747192b4f9a01a1f

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-skbio/-/compare/88adc7cb5a9f1c6561b2c40f8a3ce36ebd705b90...e0d98b5376728c4f57b1aca5747192b4f9a01a1f
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