[med-svn] [Git][med-team/samtools][upstream] New upstream version 1.19

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch upstream at Debian Med / samtools


Commits:
73082b5f by Étienne Mollier at 2023-12-15T16:06:55+01:00
New upstream version 1.19
- - - - -


30 changed files:

- NEWS → NEWS.md
- README
- bam_cat.c
- bam_markdup.c
- bam_plcmd.c
- bam_sort.c
- bam_split.c
- bamtk.c
- coverage.c
- doc/samtools-addreplacerg.1
- doc/samtools-ampliconclip.1
- doc/samtools-ampliconstats.1
- doc/samtools-bedcov.1
- doc/samtools-calmd.1
- doc/samtools-cat.1
- doc/samtools-collate.1
- doc/samtools-consensus.1
- doc/samtools-coverage.1
- doc/samtools-cram-size.1
- doc/samtools-depad.1
- doc/samtools-depth.1
- doc/samtools-dict.1
- doc/samtools-faidx.1
- doc/samtools-fasta.1
- doc/samtools-fixmate.1
- doc/samtools-flags.1
- doc/samtools-flagstat.1
- doc/samtools-fqidx.1
- doc/samtools-head.1
- doc/samtools-idxstats.1


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/samtools/-/commit/73082b5feb563379442ff710c06cb5c8dc26c678

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