[med-svn] [Git][med-team/busco][master] 4 commits: Added README

Israel Komolehin (@Komolehin) gitlab at salsa.debian.org
Fri Dec 15 17:54:51 GMT 2023



Israel Komolehin pushed to branch master at Debian Med / busco


Commits:
172a98c3 by Komolehin Israel Timilehin at 2023-12-15T17:08:56+00:00
Added README

- - - - -
5eeb0913 by Komolehin Israel Timilehin at 2023-12-15T17:09:31+00:00
Updated copyright

- - - - -
04b10cc9 by Komolehin Israel Timilehin at 2023-12-15T17:12:17+00:00
Updated changelog

- - - - -
2119ef11 by Komolehin Israel Timilehin at 2023-12-15T17:52:23+00:00
Updated copyright

- - - - -


3 changed files:

- debian/changelog
- debian/copyright
- + debian/tests/data/README.md


Changes:

=====================================
debian/changelog
=====================================
@@ -1,3 +1,11 @@
+busco (5.5.0-2) UNRELEASED; urgency=medium
+
+  
+  * Added autopkgtest to check hmmer and prodigal integration (Closes: #1010653)
+  * Updated copyright
+
+ -- Komolehin Israel Timilehin <komolehinisrael at gmail.com>  Fri, 15 Dec 2023 17:09:43 +0000
+
 busco (5.5.0-1) unstable; urgency=medium
 
   * New upstream version


=====================================
debian/copyright
=====================================
@@ -10,6 +10,11 @@ Files: debian/*
 Copyright: 2020 Andreas Tille <tille at debian.org>
 License: MIT
 
+Files: debian/tests/data/*
+Copyright: Busco
+Source: wget https://busco-data.ezlab.org/v5/data/lineages/bacteria_odb10.2020-03-06.tar.gz
+Licence: CC-BY-ND-4.0
+
 License: MIT
  Permission is hereby granted, free of charge, to any person obtaining a copy
  of this software and associated documentation files (the "Software"), to deal
@@ -28,3 +33,73 @@ License: MIT
  LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
  OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
  SOFTWARE.
+
+Licence: CC-BY-ND-4.0
+ Creative Commons Corporation ("Creative Commons") is not a law firm and
+ does not provide legal services or legal advice. Distribution of
+ Creative Commons public licenses does not create a lawyer-client or
+ other relationship. Creative Commons makes its licenses and related
+ information available on an "as-is" basis. Creative Commons gives no
+ warranties regarding its licenses, any material licensed under their
+ terms and conditions, or any related information. Creative Commons
+ disclaims all liability for damages resulting from their use to the
+ fullest extent possible.
+ .
+ Using Creative Commons Public Licenses
+ .
+ Creative Commons public licenses provide a standard set of terms and
+ conditions that creators and other rights holders may use to share
+ original works of authorship and other material subject to copyright
+ and certain other rights specified in the public license below. The
+ following considerations are for informational purposes only, are not
+ exhaustive, and do not form part of our licenses.
+ .
+ Considerations for licensors: Our public licenses are
+ intended for use by those authorized to give the public
+ permission to use material in ways otherwise restricted by
+ copyright and certain other rights. Our licenses are
+ irrevocable. Licensors should read and understand the terms
+ and conditions of the license they choose before applying it.
+ Licensors should also secure all rights necessary before
+ applying our licenses so that the public can reuse the
+ material as expected. Licensors should clearly mark any
+ material not subject to the license. This includes other CC-
+ licensed material, or material used under an exception or
+ limitation to copyright. More considerations for licensors:
+ wiki.creativecommons.org/Considerations_for_licensors
+ .
+ Considerations for the public: By using one of our public
+ licenses, a licensor grants the public permission to use the
+ licensed material under specified terms and conditions. If
+ the licensor's permission is not necessary for any reason--for
+ example, because of any applicable exception or limitation to
+ copyright--then that use is not regulated by the license. Our
+ licenses grant only permissions under copyright and certain
+ other rights that a licensor has authority to grant. Use of
+ the licensed material may still be restricted for other
+ reasons, including because others have copyright or other
+ rights in the material. A licensor may make special requests,
+ such as asking that all changes be marked or described.
+ Although not required by our licenses, you are encouraged to
+ respect those requests where reasonable. More considerations
+ for the public:
+ wiki.creativecommons.org/Considerations_for_licensees
+ .
+ Creative Commons is not a party to its public
+ licenses. Notwithstanding, Creative Commons may elect to apply one of
+ its public licenses to material it publishes and in those instances
+ will be considered the “Licensor.” The text of the Creative Commons
+ public licenses is dedicated to the public domain under the CC0 Public
+ Domain Dedication. Except for the limited purpose of indicating that
+ material is shared under a Creative Commons public license or as
+ otherwise permitted by the Creative Commons policies published at
+ creativecommons.org/policies, Creative Commons does not authorize the
+ use of the trademark "Creative Commons" or any other trademark or logo
+ of Creative Commons without its prior written consent including,
+ without limitation, in connection with any unauthorized modifications
+ to any of its public licenses or any other arrangements,
+ understandings, or agreements concerning use of licensed material. For
+ the avoidance of doubt, this paragraph does not form part of the
+ public licenses.
+ .
+ Creative Commons may be contacted at creativecommons.org.
\ No newline at end of file


=====================================
debian/tests/data/README.md
=====================================
@@ -0,0 +1,4 @@
+Test for busco
+
+The data for the test can be referenced from:
+        https://busco-data.ezlab.org/v5/data/lineages/bacteria_odb10.2020-03-06.tar.gz
\ No newline at end of file



View it on GitLab: https://salsa.debian.org/med-team/busco/-/compare/214aaa52c49bdab08e37432ee4a4bb2413868eb8...2119ef11403ac4bab6d784b2ad9b43494021e0d0

-- 
View it on GitLab: https://salsa.debian.org/med-team/busco/-/compare/214aaa52c49bdab08e37432ee4a4bb2413868eb8...2119ef11403ac4bab6d784b2ad9b43494021e0d0
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20231215/93f4032a/attachment-0001.htm>


More information about the debian-med-commit mailing list