[med-svn] [Git][med-team/python-biopython][master] 8 commits: routine-update: New upstream version

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / python-biopython


Commits:
c18efe28 by Étienne Mollier at 2023-07-09T18:28:38+02:00
routine-update: New upstream version

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72c970f0 by Étienne Mollier at 2023-07-09T18:28:39+02:00
New upstream version 1.81+dfsg
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5f104be7 by Étienne Mollier at 2023-07-09T18:28:50+02:00
Update upstream source from tag 'upstream/1.81+dfsg'

Update to upstream version '1.81+dfsg'
with Debian dir 7a48e221fad6109faec3c6243f19e4276e572dbf
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d70655f7 by Étienne Mollier at 2023-07-09T18:29:54+02:00
d/control: remove obsolete version constraint on dssp.

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b6464225 by Étienne Mollier at 2023-07-09T18:30:30+02:00
numpy-1.24.patch: remove: applied upstream.

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5f317f3a by Étienne Mollier at 2023-07-09T19:02:48+02:00
muscle3.patch: fix typo in patch description.

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63cbd906 by Étienne Mollier at 2023-07-09T20:17:45+02:00
remove-distutils-import.patch: add.

The occurrence to distutils.util doesn't look to be in use.  Lintian
flags its presence, so it might be better to just remove it.

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b99f8b6c by Étienne Mollier at 2023-07-09T20:22:08+02:00
ready to upload to experimental.

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30 changed files:

- .flake8
- .pre-commit-config.yaml
- Bio/Align/__init__.py
- Bio/Align/_aligners.c
- Bio/Align/a2m.py
- Bio/Align/bed.py
- Bio/Align/bigbed.py
- Bio/Align/bigmaf.py
- Bio/Align/bigpsl.py
- Bio/Align/clustal.py
- Bio/Align/emboss.py
- Bio/Align/exonerate.py
- Bio/Align/fasta.py
- Bio/Align/hhr.py
- Bio/Align/interfaces.py
- Bio/Align/maf.py
- Bio/Align/mauve.py
- Bio/Align/msf.py
- Bio/Align/nexus.py
- Bio/Align/phylip.py
- Bio/Align/psl.py
- Bio/Align/sam.py
- Bio/Align/stockholm.py
- Bio/Align/tabular.py
- Bio/CAPS/__init__.py
- Bio/Data/PDBData.py
- Bio/Data/SCOPData.py
- + Bio/Entrez/DTDs/elink.dtd
- + Bio/Entrez/DTDs/epost.dtd
- + Bio/Entrez/DTDs/esummary_gene.dtd


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/95b72c445ba0b285d92afb89066c4f96cfec36e5...b99f8b6cc460cd767124103aa9f46883c699d920

-- 
View it on GitLab: https://salsa.debian.org/med-team/python-biopython/-/compare/95b72c445ba0b285d92afb89066c4f96cfec36e5...b99f8b6cc460cd767124103aa9f46883c699d920
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