[med-svn] [Git][med-team/htslib][master] 12 commits: routine-update: New upstream version

[Étienne Mollier (@emollier)]

Étienne Mollier pushed to branch master at Debian Med / htslib


Commits:
da0e225f by Étienne Mollier at 2023-06-11T15:15:39+02:00
routine-update: New upstream version

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edcf7093 by Étienne Mollier at 2023-06-11T15:15:40+02:00
New upstream version 1.17+ds
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a74b7d95 by Étienne Mollier at 2023-06-11T15:15:42+02:00
Update upstream source from tag 'upstream/1.17+ds'

Update to upstream version '1.17+ds'
with Debian dir f3057c68b5a6cdf4da4a716d162ba9fbf554fcae
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5c299fc8 by Étienne Mollier at 2023-06-11T15:15:42+02:00
routine-update: Standards-Version: 4.6.2

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964596f2 by Étienne Mollier at 2023-06-11T15:18:47+02:00
d/control: fix indentation in build dependencies

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ce668256 by Étienne Mollier at 2023-06-11T15:19:24+02:00
d/control: clear fields with obsolete packages

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f78af997 by Étienne Mollier at 2023-06-11T15:19:48+02:00
no_git_version patch: forwarding not-needed

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f8d94e58 by Étienne Mollier at 2023-06-11T15:24:56+02:00
fPIC.patch: unfuzz

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85982375 by Étienne Mollier at 2023-06-11T15:25:28+02:00
cram_to_bam_export.patch: unfuzz

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760426bc by Étienne Mollier at 2023-06-11T15:25:45+02:00
fix_sequence_of_linked_libs.patch: unfuzz

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39e64da4 by Étienne Mollier at 2023-06-11T15:33:22+02:00
trim-file-prefix.patch: refresh

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2bd712a9 by Étienne Mollier at 2023-06-11T15:41:13+02:00
update changelog (with TODO item)

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30 changed files:

- INSTALL
- LICENSE
- Makefile
- NEWS
- bgzf.c
- bgzip.1
- bgzip.c
- config.mk.in
- configure.ac
- + cram/README
- cram/cram_codecs.c
- cram/cram_codecs.h
- cram/cram_decode.c
- cram/cram_encode.c
- cram/cram_external.c
- cram/cram_io.c
- cram/cram_structs.h
- debian/changelog
- debian/control
- debian/patches/cram_to_bam_export.patch
- debian/patches/fPIC.patch
- debian/patches/fix_sequence_of_linked_libs.patch
- debian/patches/no_git_version
- debian/patches/trim-file-prefix.patch
- faidx.c
- hts.c
- htsfile.1
- htsfile.c
- htslib-s3-plugin.7
- + htslib.map


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/htslib/-/compare/e317c71930b3248d0ba927d48ab5f8e39f50fb5e...2bd712a9c86fa7f217a84d612a6365cacd87b028

-- 
View it on GitLab: https://salsa.debian.org/med-team/htslib/-/compare/e317c71930b3248d0ba927d48ab5f8e39f50fb5e...2bd712a9c86fa7f217a84d612a6365cacd87b028
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